RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZBTB44Q8NCP5 570 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 ARRDC2Q8TBH0 407 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 POM121Q96HA1 1249 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 PLA2G12AQ9BZM1 189 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 MANBALQ9NQG1 85 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 NAGKQ9UJ70 344 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 FAM74A7A6NL05 159 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 IL1R2P27930 398 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 EMX1Q04741 257 aaPredicted RBP8.21□□□□□ -1.09
NIPBL-202ENST00000448238 GALNT16Q8N428 558 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 DMAC2Q9NW81 257 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 OR6C3Q9NZP0 311 aa8.21□□□□□ -1.09
NIPBL-202ENST00000448238 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 POM121BA6NF01 834 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 RAB29O14966 203 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 FCRLBQ6BAA4 426 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SIGIRRQ6IA17 410 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SPRED1Q7Z699 444 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 OR51S1Q8NGJ8 323 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 ALOXE3Q9BYJ1 711 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 CACNA1SQ13698 1873 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 HSPB2A8KAH6 182 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 GPR32O75388 356 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PGA4P0DJD7 388 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PGA5P0DJD9 388 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 KIR3DL2P43630 455 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 ERVFRD-1P60508 538 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 HSPB2Q16082 182 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SLC35D3Q5M8T2 416 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 FBXL22Q6P050 247 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 LINC00469Q8N7U9 141 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 CDCA3Q99618 268 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 ST6GALNAC4Q9H4F1 302 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 DUSP13Q9UII6 198 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 NXT1Q9UKK6 140 aaKnown RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 TRAPPC4Q9Y296 219 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 MYO5BQ9ULV0 1848 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 MYBPHLA2RUH7 354 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PAPLNO95428 1278 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SDHAP31040 664 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 CCR6P51684 374 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 C17orf67Q0P5P2 114 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 TREML2Q5T2D2 321 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 DCXRQ7Z4W1 244 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 TBC1D26Q86UD7 250 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SLC38A9Q8NBW4 561 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 FBXL18Q96ME1 805 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 F2RL3Q96RI0 385 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 DPH2Q9BQC3 489 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 GPR87Q9BY21 358 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PARP12Q9H0J9 701 aaKnown RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PRDM7Q9NQW5 492 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 KLRC4-KLRK1H3BQV0 150 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 UBE2L6O14933 153 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF260Q3ZCT1 412 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 CPEB2Q7Z5Q1 589 aaKnown RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 C1orf127Q8N9H9 656 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 IL22RA2Q969J5 263 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SLC35B4Q969S0 331 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 CPPED1Q9BRF8 314 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 PARD6GQ9BYG4 376 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 UBE2ZQ9H832 354 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-202ENST00000448238 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
NIPBL-202ENST00000448238 OR4C46A6NHA9 309 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 SLCO2B1O94956 709 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 NXPH3O95157 252 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 OR4Q2P0C623 313 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 CXCL9Q07325 125 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 DOC2AQ14183 400 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 PNPLA1Q8N8W4 532 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 PCYT2Q99447 389 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ELOVL1Q9BW60 279 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ACPTQ9BZG2 426 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 KIR2DS3Q14952 304 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 TWIST1Q15672 202 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 AAED1Q7RTV5 226 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 CD99L2Q8TCZ2 262 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 GHSRQ92847 366 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 SPACA9Q96E40 222 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ANKRD31Q8N7Z5 1873 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 CBR3O75828 277 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ZNF888P0CJ79 500 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-202ENST00000448238 IRS1P35568 1242 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 RGMBQ6NW40 437 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 OR8I2Q8N0Y5 310 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ACOT4Q8N9L9 421 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 OR5R1Q8NH85 324 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 NAT6Q93015 286 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 KTI12Q96EK9 354 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-202ENST00000448238 HSD17B14Q9BPX1 270 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ABCA9Q8IUA7 1624 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 SPHKAPQ2M3C7 1700 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 LAMTOR5O43504 91 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 PIP5KL1Q5T9C9 394 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 FIGLAQ6QHK4 219 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 TGIF2LYQ8IUE0 185 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 GPR137Q96N19 417 aa8.2□□□□□ -1.1
NIPBL-202ENST00000448238 ADGRL4Q9HBW9 690 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms