RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TMED10P49755 219 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 EIF2B2P49770 351 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PDLIM4P50479 330 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GFERP55789 205 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CAV3P56539 151 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR1D5P58170 312 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR2B6P58173 313 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 STARD6P59095 220 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRPS1P60891 318 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSTF1Q05048 431 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CBX3Q13185 183 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MYBPHQ13203 477 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SRSF5Q13243 272 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ASAH1Q13510 395 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CRMP1Q14194 572 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PON3Q15166 354 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SF3B4Q15427 424 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ISXQ2M1V0 245 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 EIF2S3LQ2VIR3 472 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 DEFB133Q30KQ1 61 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GLYR1Q49A26 553 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PYDC2Q56P42 97 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CT45A2Q5DJT8 189 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM76BQ5HYJ3 339 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC35D3Q5M8T2 416 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 LCN1P1Q5VSP4 162 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 NKAIN2Q5VXU1 208 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GGNBP1Q5YKI7 109 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SIGIRRQ6IA17 410 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF544Q6NX49 715 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM198BQ6UWH4 519 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PAMR1Q6UXH9 720 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 NHLRC1Q6VVB1 395 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 B3GLCTQ6Y288 498 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM91Q6ZNR0 172 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CEACAM19Q7Z692 300 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 AKAP14Q86UN6 197 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TPRA1Q86W33 373 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 RAB43Q86YS6 212 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPEM1Q8N4L4 309 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MS4A15Q8N5U1 240 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 METTL27Q8N6F8 245 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF615Q8N8J6 731 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 POC1AQ8NBT0 407 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52E2Q8NGJ4 325 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR4C3Q8NH37 302 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR4K13Q8NH42 304 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 NEIL3Q8TAT5 605 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACOT12Q8WYK0 555 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ROBO4Q8WZ75 1007 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPSB1Q96BD6 273 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 EFHD2Q96C19 240 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 WBP1Q96G27 269 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRPL48Q96GC5 212 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GRAMD2BQ96HH9 432 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SENP5Q96HI0 755 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ART5Q96L15 291 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MS4A10Q96PG2 267 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TBX5Q99593 518 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GFI1Q99684 422 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATF6BQ99941 703 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 HCAR1Q9BXC0 346 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC19A3Q9BZV2 496 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 NDEL1Q9GZM8 345 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ADGRL4Q9HBW9 690 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MCCC2Q9HCC0 563 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 TIGARQ9NQ88 270 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 EXOSC3Q9NQT5 275 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 UBQLN4Q9NRR5 601 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR6C3Q9NZP0 311 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPAP1Q9NZP6 1156 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 COMMD3Q9UBI1 195 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 MALT1Q9UDY8 824 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHRNA9Q9UGM1 479 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 GMEB2Q9UKD1 530 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PAIP2BQ9ULR5 123 aaKnown RBP3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 VDAC3Q9Y277 283 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC6A5Q9Y345 797 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF337Q9Y3M9 751 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 IER3IP1Q9Y5U9 82 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 RNF215Q9Y6U7 377 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 BPTFQ12830 3046 aa3.03□□□□□ -1.92
HMGB3P11-201ENST00000440127 PLXND1Q9Y4D7 1925 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGHV1OR21-1A0A087WYE8 117 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 IGKV3D-11A0A0A0MRZ8 115 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 LINC00854A0A1B0GVQ3 168 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 SMIM30A4D0T7 59 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 FRG2CA6NGY1 282 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 A8MU76 341 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM25AB3EWG3 89 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM25CB3EWG5 89 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 FAM25GB3EWG6 89 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 E9PI62 339 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 BMPR1BO00238 502 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 WNT9BO14905 357 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 TO15178 435 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 ZNF264O43296 627 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 NUDT21O43809 227 aaKnown RBP3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 DUX1O43812 170 aa3.02□□□□□ -1.93
HMGB3P11-201ENST00000440127 EIF4E2O60573 245 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms