RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 RPS10P46783 165 aaKnown RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 SLC25A1P53007 311 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 RAB2AP61019 212 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 RAB32Q13637 225 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 CARD17Q5XLA6 110 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ZNF595Q8IYB9 648 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ZNF440Q8IYI8 595 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 ZNF565Q8N9K5 539 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 ASB5Q8WWX0 329 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 TOMM40LQ969M1 308 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
COPB1-202ENST00000439561 ZNF700Q9H0M5 742 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 SPACA1Q9HBV2 294 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 PRODH2Q9UF12 536 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 DENND4CQ5VZ89 1909 aa8.14□□□□□ -1.11
COPB1-202ENST00000439561 A0A0J9YY10 115 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 H3BML4 177 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 HCRTR1O43613 425 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ICOSLGO75144 302 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 OR13C7P0DN81 318 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 CTLA4P16410 223 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 S100A2P29034 98 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FMODQ06828 376 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ZNF345Q14585 488 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 NCMAPQ5T1S8 102 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ZNF529Q6P280 563 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FAM24BQ8N5W8 94 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 GPR119Q8TDV5 335 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 NRIP2Q9BQI9 281 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 UTP23Q9BRU9 249 aaKnown RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 ALX4Q9H161 411 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 CNTD2Q9H8S5 307 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FAM60AQ9NP50 221 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 EHFQ9NZC4 300 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 C14orf166Q9Y224 244 aaKnown RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FBXO7Q9Y3I1 522 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 KIAA1671Q9BY89 1806 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 MSGN1A6NI15 193 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 K7EPK0 472 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ZNF354AO60765 605 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 ZNF44P15621 663 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ABOP16442 354 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 GPM6BQ13491 265 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 TOMM34Q15785 309 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 IAH1Q2TAA2 248 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 C9orf152Q5JTZ5 239 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ABHD12BQ7Z5M8 362 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 BIVMQ86UB2 503 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FAM71E2Q8N5Q1 922 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 WDSUB1Q8N9V3 476 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 OR52N4Q8NGI2 321 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ASB17Q8WXJ9 295 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 EDAQ92838 391 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 RAB3CQ96E17 227 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 EMC6Q9BV81 110 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 NXF5Q9H1B4 397 aaKnown RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 OR5AC2Q9NZP5 309 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 GHRLQ9UBU3 117 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 PILRAQ9UKJ1 303 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 RHBDD3Q9Y3P4 386 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 WIF1Q9Y5W5 379 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 URGCP-MRPS24S4R325 110 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 MTCL1Q9Y4B5 1905 aaKnown RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PPH5 198 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 TMEM150CB9EJG8 249 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 IFNA21P01568 189 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 CD1AP06126 327 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ACAA1P09110 424 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 HNRNPA1P09651 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
COPB1-202ENST00000439561 CCL5P13501 91 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 RGS19P49795 217 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 TAS2R31P59538 309 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 HHEXQ03014 270 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 FHL1Q13642 323 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 CCINQ13939 588 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 CHRFAM7AQ494W8 412 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 ZNF704Q6ZNC4 412 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 SLC25A42Q86VD7 318 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 SEMA6DQ8NFY4 1073 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 OR6S1Q8NH40 331 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 MITD1Q8WV92 249 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 SLAMF9Q96A28 289 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 NMNAT2Q9BZQ4 307 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 KCNJ16Q9NPI9 418 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 VSX1Q9NZR4 365 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 GDF2Q9UK05 429 aaPredicted RBP8.13□□□□□ -1.11
COPB1-202ENST00000439561 RAB22AQ9UL26 194 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 VDAC3Q9Y277 283 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 AMDHD2Q9Y303 409 aa8.13□□□□□ -1.11
COPB1-202ENST00000439561 HEATR5AQ86XA9 2040 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 IGKV1D-42A0A075B6H8 117 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 TRBV5-7A0A0A0MS05 114 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 PRSS37A4D1T9 235 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 MBTPS2O43462 519 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 SLC25A4P12235 298 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms