RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF557Q8N988 423 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 OR4F6Q8NGB9 312 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 OR9K2Q8NGE7 335 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 PIBF1Q8WXW3 757 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 FBXO32Q969P5 355 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 CLDN23Q96B33 292 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 SMIM10Q96HG1 83 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 HSFY1Q96LI6 401 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 PANX2Q96RD6 677 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 FMO2Q99518 471 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 SH3GL3Q99963 347 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 TRIM4Q9C037 500 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 ADAP2Q9NPF8 381 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 CTPS2Q9NRF8 586 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 SPATA7Q9P0W8 599 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 STOX2Q9P2F5 926 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 HPCAL4Q9UM19 191 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 GINS2Q9Y248 185 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 ANKRD17O75179 2603 aaKnown RBP1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 PTPN13Q12923 2485 aa1.75□□□□□ -2.13
HMGB1P31-201ENST00000437242 TET2Q6N021 2002 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 APC2O95996 2303 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 DOPEY2Q9Y3R5 2298 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PLXND1Q9Y4D7 1925 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCDC171Q6TFL3 1326 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 UBR5O95071 2799 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 IGLV3-22A0A075B6J6 115 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TRAV39A0A0B4J263 110 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 A0A0B4J2A0 478 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ARHGEF35A5YM69 484 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 FOXE1O00358 373 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCL21O00585 134 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PSTPIP1O43586 416 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CYTH3O43739 400 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TNFSF13O75888 250 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ERLIN2O94905 339 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 C1orf105O95561 183 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCNE2O96020 404 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SERPINA3P01011 423 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ALDOBP05062 364 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 RETP07949 1114 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CSF3P09919 207 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TOP1P11387 765 aaKnown RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 KITLGP21583 273 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SLC2A5P22732 501 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCNCP24863 283 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 IFNA8P32881 189 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 RORAP35398 523 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCR2P41597 374 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PI4KAP42356 2102 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 NMUP48645 174 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 MNAT1P51948 309 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SUB1P53999 127 aaKnown RBP eCLIP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PFN3P60673 137 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ACTR3P61158 418 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 HERVK_113P61574 105 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 KCNJ2P63252 427 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 LRRC74AQ0VAA2 488 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 BST1Q10588 318 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PDIA2Q13087 525 aaKnown RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ITGB3BPQ13352 177 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PIGGQ5H8A4 983 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 UQCC3Q6UW78 93 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ZNF621Q6ZSS3 439 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TAS2R42Q7RTR8 314 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CDR2LQ86X02 465 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ZADH2Q8N4Q0 377 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ARIH2OSQ8N7S6 290 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CEP112Q8N8E3 955 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CCDC54Q8NEL0 328 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 OR1L6Q8NGR2 347 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 FAM110BQ8TC76 370 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 DTX3LQ8TDB6 740 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SLC2A14Q8TDB8 520 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 CD300LFQ8TDQ1 290 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 EXOSC8Q96B26 276 aaKnown RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TUBGCP3Q96CW5 907 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ASB9Q96DX5 294 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TCEAL4Q96EI5 215 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 AURKBQ96GD4 344 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 RNF185Q96GF1 192 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 MS4A4EQ96PG1 132 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 OSBPL10Q9BXB5 764 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ILKAPQ9H0C8 392 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 LINC00597Q9H2U6 94 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 DMAP1Q9NPF5 467 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 RGS18Q9NS28 235 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SLC2A8Q9NY64 477 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 SHPKQ9UHJ6 478 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PACSIN2Q9UNF0 486 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 TRAPPC4Q9Y296 219 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 PRG3Q9Y2Y8 225 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 WSB1Q9Y6I7 421 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 MYOFQ9NZM1 2061 aa1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 ZNF638Q14966 1978 aaKnown RBP1.74□□□□□ -2.13
HMGB1P31-201ENST00000437242 FBN2P35556 2912 aa1.73□□□□□ -2.13
HMGB1P31-201ENST00000437242 PCNX2A6NKB5 2137 aa1.73□□□□□ -2.13
HMGB1P31-201ENST00000437242 PLXNA2O75051 1894 aa1.73□□□□□ -2.13
HMGB1P31-201ENST00000437242 NID2Q14112 1375 aa1.73□□□□□ -2.13
HMGB1P31-201ENST00000437242 CSMD1Q96PZ7 3565 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms