RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 EXOSC3Q9NQT5 275 aaKnown RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 OR2AT4A6NND4 320 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 NTN3O00634 580 aaPredicted RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 RECKO95980 971 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 PAHP00439 452 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 FAM87AP0C7U9 286 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 SELEP16581 610 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 CD53P19397 219 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 CPT2P23786 658 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 ACAA2P42765 397 aaKnown RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 ERVK-16P61578 105 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 DBPQ10586 325 aaPredicted RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 CDCP2Q5VXM1 449 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 TMEM251Q8N6I4 163 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 OR6F1Q8NGZ6 308 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 TP63Q9H3D4 680 aaPredicted RBP8.71□□□□□ -1.02
CMSS1-201ENST00000421999 DUSP21Q9H596 190 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 NARFLQ9H6Q4 476 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 NRIP3Q9NQ35 241 aa8.71□□□□□ -1.02
CMSS1-201ENST00000421999 A0A1W2PQD3 144 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 IGKV3-11P04433 115 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF32P17041 273 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ADH6P28332 368 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 GABRA4P48169 554 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 SNRPD2P62316 118 aaKnown RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 HAGHLQ6PII5 290 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 APOOLQ6UXV4 268 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 GTPBP8Q8N3Z3 284 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 LSMEM1Q8N8F7 131 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 SPERTQ8NA61 448 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 FDCSPQ8NFU4 85 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 OR56B1Q8NGI3 324 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 OR8D4Q8NGM9 314 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 RAB3CQ96E17 227 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 NLKQ9UBE8 527 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 MED13LQ71F56 2210 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 SMCO3A2RU48 225 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 C17orf51A8MQB3 221 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 GSTP1P09211 210 aaKnown RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 OPRM1P35372 400 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ETV1P50549 477 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 PMPCAQ10713 525 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 AQP6Q13520 282 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 YIF1BQ5BJH7 314 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 MEX3BQ6ZN04 569 aaKnown RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ZBTB8BQ8NAP8 495 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 OR10K1Q8NGX5 313 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 RNF32Q9H0A6 362 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 NTMQ9P121 344 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 ESPL1Q14674 2120 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 CDX4O14627 284 aaPredicted RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 RER1O15258 196 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 TSPAN2O60636 221 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 CDC14BO60729 498 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 APEX1P27695 318 aaKnown RBP8.7□□□□□ -1.02
CMSS1-201ENST00000421999 KIR2DL3P43628 341 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 GALEQ14376 348 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 PCOLCEQ15113 449 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 PPA1Q15181 289 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 APCDD1LQ8NCL9 501 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 RDH5Q92781 318 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 BANF2Q9H503 90 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 CPNE5Q9HCH3 593 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 FAIMQ9NVQ4 179 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 TBCCD1Q9NVR7 557 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 FZR1Q9UM11 496 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 POLDIP2Q9Y2S7 368 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 CEPT1Q9Y6K0 416 aa8.7□□□□□ -1.02
CMSS1-201ENST00000421999 CHD7Q9P2D1 2997 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 IGKV3D-11A0A0A0MRZ8 115 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 CTDSP2O14595 271 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 XRCC2O43543 280 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ENSAO43768 121 aaKnown RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 HPGDSO60760 199 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 NRASP01111 189 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 COX6A1P12074 109 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 EPHA1P21709 976 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ACHEP22303 614 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 GLRA1P23415 457 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 PTAFRP25105 342 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 LIPAP38571 399 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TGM4P49221 684 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 GNMTQ14749 295 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TIPARPQ7Z3E1 657 aaKnown RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ATG4DQ86TL0 474 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TPRA1Q86W33 373 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 OR2M3Q8NG83 312 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 OR51F2Q8NH61 342 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 SLC35B4Q969S0 331 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 REEP6Q96HR9 211 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 OPALINQ96PE5 141 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 GPA33Q99795 319 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 NICN1Q9BSH3 213 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF700Q9H0M5 742 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF286AQ9HBT8 521 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms