RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 ZNF728P0DKX0 622 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 FFAR4Q5NUL3 377 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 BTNL3Q6UXE8 466 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 LRP11Q86VZ4 500 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 PLPP7Q8NBV4 271 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 OR10AD1Q8NGE0 317 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 OR1P1Q8NH06 330 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 ZMAT3Q9HA38 289 aaKnown RBP5.9□□□□□ -1.46
SBNO1-202ENST00000420886 ZDHHC8Q9ULC8 765 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 SSSCA1O60232 199 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 TACR1P25103 407 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 PAFAH1B2P68402 229 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 IHHQ14623 411 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 FAM27D1Q5T7N8 215 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 LRRTM4Q86VH4 590 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 CLEC1AQ8NC01 280 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 MACROD1Q9BQ69 325 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 DOK5Q9P104 306 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 KNTC1P50748 2209 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 GEMIN2O14893 280 aaKnown RBP5.9□□□□□ -1.46
SBNO1-202ENST00000420886 KCNQ2O43526 872 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 DPPA3Q6W0C5 159 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 IL22RA2Q969J5 263 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 SERINC1Q9NRX5 453 aa5.9□□□□□ -1.46
SBNO1-202ENST00000420886 DUXBA0A1W2PPF3 345 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 CNN1P51911 297 aaKnown RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 PRRT3Q5FWE3 981 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 ARRDC1Q8N5I2 433 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 ZSCAN4Q8NAM6 433 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 TBX15Q96SF7 602 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 MRPL17Q9NRX2 175 aaKnown RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 KCNIP1Q9NZI2 227 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 IL36AQ9UHA7 158 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 HHLA1C9JL84 531 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 SELENOFO60613 162 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 GNB3P16520 340 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 HMGA2P52926 109 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 MEP1BQ16820 701 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 WDR5BQ86VZ2 330 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 SLC38A9Q8NBW4 561 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 JSRP1Q96MG2 331 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 BOCQ9BWV1 1114 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 TMEM121BQ9BXQ6 578 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 PELI2Q9HAT8 420 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 ELOVL3Q9HB03 270 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 KIF26AQ9ULI4 1882 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 GREB1LQ9C091 1923 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 TRDCB7Z8K6 153 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 GLCEO94923 617 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 STAG3L2P0CL84 134 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 NTF3P20783 257 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 MSMO1Q15800 293 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 TCTN3Q6NUS6 607 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 OR2T10Q8NGZ9 312 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 NAA11Q9BSU3 229 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 MYOZ1Q9NP98 299 aaPredicted RBP5.9□□□□□ -1.47
SBNO1-202ENST00000420886 CBLN4Q9NTU7 201 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 MTX2O75431 263 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 TMEM225BP0DP42 221 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 DNLZQ5SXM8 178 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 DCAF4L2Q8NA75 395 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 NCKAP5O14513 1909 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 LCTP09848 1927 aa5.9□□□□□ -1.47
SBNO1-202ENST00000420886 PRAMEF27A3QJZ7 478 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 KLRG2A4D1S0 409 aaPredicted RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 TRAPPC6AO75865 159 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 ASGR2P07307 311 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 MPGP29372 298 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 AVPR2P30518 371 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 PDGFRLQ15198 375 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 PRAMEF9Q5VWM5 478 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 MAMSTRQ6ZN01 415 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 MMP21Q8N119 569 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 MR1Q95460 341 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 OR1A2Q9Y585 309 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 A0A1W2PQ45 241 aaPredicted RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 A0A1W2PQY0 241 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 PHF1O43189 567 aaPredicted RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 LANCL1O43813 399 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 ACAA2P42765 397 aaKnown RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 MMP16P51512 607 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 PNLIPRP3Q17RR3 467 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 WDR73Q6P4I2 378 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 TMPPEQ6ZT21 453 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 GKN2Q86XP6 184 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 TFGQ92734 400 aaPredicted RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 R3HDM4Q96D70 268 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 STARD4Q96DR4 205 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 FAM122AQ96E09 287 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 PLEKHF2Q9H8W4 249 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 H0Y8G0 127 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 SOX1O00570 391 aaPredicted RBP5.89□□□□□ -1.47
SBNO1-202ENST00000420886 WNT10BO00744 389 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 FRS3O43559 492 aa5.89□□□□□ -1.47
SBNO1-202ENST00000420886 HMGN2P05204 90 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms