RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 SUB1P53999 127 aaKnown RBP eCLIP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 TATDN3Q17R31 274 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 BRICD5Q6PL45 260 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 PAQR6Q6TCH4 344 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 ADGRG5Q8IZF4 528 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 OR2L13Q8N349 312 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 RAB3CQ96E17 227 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 OPN3Q9H1Y3 402 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 FOXD3Q9UJU5 478 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 DLEC1Q9Y238 1755 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 KLK8O60259 260 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 SORBS2O94875 1100 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CHATP28329 748 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 NXNL2Q5VZ03 156 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 VN1R4Q7Z5H5 301 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 LIN7BQ9HAP6 207 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 DICER1Q9UPY3 1922 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 A0A1W2PQM1 296 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 F2RL2O00254 374 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A6P0DMU7 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A5P0DMU8 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A7P0DMV0 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A8P0DMV1 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A9P0DMV2 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A2Q5DJT8 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A1Q5HYN5 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CT45A3Q8NHU0 189 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 ZNF251Q9BRH9 671 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 HTR2CP28335 458 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 Q6ZTK2 550 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 NOXA1Q86UR1 476 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 CCDC71Q8IV32 467 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 OR6F1Q8NGZ6 308 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 UHRF2Q96PU4 802 aa15.23■□□□□ 0.03
SYNGAP1-202ENST00000418600 SLC2A10O95528 541 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 TLE1Q04724 770 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 KRBOX4Q5JUW0 171 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 SPARTQ8N0X7 666 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 C17orf50Q8WW18 174 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 RPEQ96AT9 228 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 C1orf123Q9NWV4 160 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 LY86O95711 162 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 MYF6P23409 242 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 HOXA6P31267 233 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 HAAOP46952 286 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 GK2Q14410 553 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 EBPQ15125 230 aaKnown RBP15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 SLC25A35Q3KQZ1 300 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 NOX4Q9NPH5 578 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 GPR55Q9Y2T6 319 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 KIAA1217Q5T5P2 1943 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 CDHR4A6H8M9 788 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 ZNF254O75437 659 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 CD160O95971 181 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 PRPH2P23942 346 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 PDLIM3Q53GG5 364 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 OR10J5Q8NHC4 309 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 ABHD6Q9BV23 337 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 DPCDQ9BVM2 203 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 ZNF696Q9H7X3 374 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 YIF1AO95070 293 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 PTTG1O95997 202 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 UBBP0CG47 229 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 COX7A1P24310 79 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 ARSGQ96EG1 525 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 SDSLQ96GA7 329 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 GNG13Q9P2W3 67 aa15.22■□□□□ 0.03
SYNGAP1-202ENST00000418600 PCBP3P57721 371 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 RAC3P60763 192 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 SPICQ8N5J4 248 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 SECTM1Q8WVN6 248 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ISL2Q96A47 359 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ANGPTL7O43827 346 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 GMDSO60547 372 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 TOXO94900 526 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ACHEP22303 614 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ADPRMQ3LIE5 342 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 LPCAT3Q6P1A2 487 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 HES4Q9HCC6 221 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ZNF816-ZNF321PA0A0X1KG74 233 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 HSD17B6O14756 317 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 SFRP5Q5T4F7 317 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 ZNF638Q14966 1978 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 TRAV38-1A0A0B4J264 116 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 NKX2-2O95096 273 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 CEACAM3P40198 252 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 RELAQ04206 551 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 LTBQ06643 244 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 TCTEX1D2Q8WW35 142 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 GGHQ92820 318 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 NMNAT2Q9BZQ4 307 aa15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 GDF2Q9UK05 429 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-202ENST00000418600 GAPDHSO14556 408 aaPredicted RBP15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 LYRM1O43325 122 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 GPRIN2O60269 458 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 MED6O75586 246 aa15.21■□□□□ 0.02
SYNGAP1-202ENST00000418600 IL1AP01583 271 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms