RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RP2O75695 350 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RGS11O94810 467 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 AP2A1O95782 977 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C6orf47O95873 294 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C1QAP02745 245 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MT-ND1P03886 318 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 HOXB5P09067 269 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 OR2T7P0C7T2 308 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SULT1A3P0DMM9 295 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SULT1A4P0DMN0 295 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF7P17097 686 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TBXA2RP21731 343 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FGF7P21781 194 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ABCD3P28288 659 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ELK4P28324 431 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 S100A2P29034 98 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LCN1P31025 176 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FMO3P31513 532 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TNFSF8P32971 234 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CDX1P47902 265 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RPL34P49207 117 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MRPL19P49406 292 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM3BP58499 235 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 YBEYP58557 167 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ISL1P61371 349 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RPS4XP62701 263 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LOXL1Q08397 574 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CD47Q08722 323 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FABP9Q0Z7S8 132 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 NPRL3Q12980 569 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LCP2Q13094 533 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 OPCMLQ14982 345 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MED22Q15528 200 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LGALSLQ3ZCW2 172 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CBWD6Q4V339 395 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 KLHL22Q53GT1 634 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM74A1Q5RGS3 127 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 HIST2H3PS2Q5TEC6 136 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CAPN13Q6MZZ7 669 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ACSM5Q6NUN0 579 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CYHR1Q6ZMK1 362 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF813Q6ZN06 617 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RFLNAQ6ZTI6 216 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CHMP1BQ7LBR1 199 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TCF24Q7RTU0 167 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 NAA40Q86UY6 237 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LRRC28Q86X40 367 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LDLRAD3Q86YD5 345 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CLDN22Q8N7P3 220 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 OR52E4Q8NGH9 312 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 OR13C2Q8NGS9 318 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 OR9A4Q8NGU2 314 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 LKAAEAR1Q8TD35 194 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RXFP4Q8TDU9 374 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C16orf78Q8WTQ4 265 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 MITD1Q8WV92 249 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 CANT1Q8WVQ1 401 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TFAP2BQ92481 460 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 FAM120BQ96EK7 910 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C8orf49Q96NF6 230 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C7orf50Q9BRJ6 194 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RHNO1Q9BSD3 238 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 C1QTNF3Q9BXJ4 246 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SEC11CQ9BY50 192 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 GABARAPL1Q9H0R8 117 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 PTGES2Q9H7Z7 377 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 TPT1P8Q9HAU6 139 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SMCO4Q9NRQ5 59 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 ARL15Q9NXU5 204 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 SLC23A2Q9UGH3 650 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 NAGKQ9UJ70 344 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 PTGDR2Q9Y5Y4 395 aa4.83□□□□□ -1.64
ECHDC1-206ENST00000417628 RAI1Q7Z5J4 1906 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 M0R143 59 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PLA2G10O15496 165 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ARPC5O15511 151 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CFLARO15519 480 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 LYRM1O43325 122 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CALCAP01258 141 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 IFNA21P01568 189 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 IL1AP01583 271 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 C8GP07360 202 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 UBBP0CG47 229 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 UBCP0CG48 685 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 EGR2P11161 476 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 GABRA1P14867 456 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 UGT2B7P16662 529 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 IL1RNP18510 177 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 ATP6V1B2P21281 511 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 CERS1P27544 350 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 PSMB9P28065 219 aa4.82□□□□□ -1.64
ECHDC1-206ENST00000417628 NDUFS1P28331 727 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms