RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 EXTL2Q9UBQ6 330 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 NUFIP1Q9UHK0 495 aaKnown RBP7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 PRSS50Q9UI38 385 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 HHLA2Q9UM44 414 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 SPATA2Q9UM82 520 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 DHDHQ9UQ10 334 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 CAMK2AQ9UQM7 478 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 POLR1DQ9Y2S0 133 aa7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 NOSIPQ9Y314 301 aaKnown RBP7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 PHF3Q92576 2039 aaKnown RBP7.56□□□□□ -1.2
HMGN1P34-201ENST00000413023 ZFHX2Q9C0A1 2572 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 TRAV17A0A0B4J275 112 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ISPDA4D126 451 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 F5H5K5 113 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 RPL36A-HNRNPH2H7BZ11 118 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 MRPL33O75394 65 aaKnown RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 HLA-DQB1P01920 261 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 APOA1P02647 267 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 YES1P07947 543 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ITGA5P08648 1049 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 OCMP0CE72 109 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 B4GALT1P15291 398 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 CCL1P22362 96 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 DDOSTP39656 456 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ZNF84P51523 738 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 PSMA6P60900 246 aaKnown RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 TAF13Q15543 124 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 TAB1Q15750 504 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 C2orf76Q3KRA6 126 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 PLEKHN1Q494U1 663 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ELFN2Q5R3F8 820 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 C1orf100Q5SVJ3 147 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ZNF529Q6P280 563 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 MTFR2Q6P444 385 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 KLHL24Q6TFL4 600 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 ZNF283Q8N7M2 679 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 GDPD1Q8N9F7 314 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 POC5Q8NA72 575 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 CPEB3Q8NE35 698 aaKnown RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR13C3Q8NGS6 347 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR14K1Q8NGZ2 314 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 PNPLA2Q96AD5 504 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 FOXB1Q99853 325 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 PRRG4Q9BZD6 226 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 C11orf54Q9H0W9 315 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 SLCO5A1Q9H2Y9 848 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 EXO5Q9H790 373 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 GPR84Q9NQS5 396 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 CGGBP1Q9UFW8 167 aaPredicted RBP7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 FOXJ3Q9UPW0 622 aa7.55□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR6C6A6NF89 314 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 WIPF3A6NGB9 483 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 LDLRAD4O15165 306 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 CALCBP10092 127 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 PTHLHP12272 177 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 NR2C1P13056 603 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 FSTP19883 344 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 PTBP1P26599 531 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 MAPK3P27361 379 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 CFPP27918 469 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 PTH2RP49190 550 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 GRB2P62993 217 aaKnown RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 SPOCK1Q08629 439 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 TNK1Q13470 666 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 IL18Q14116 193 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 TRIM16LQ309B1 348 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 SLC36A2Q495M3 483 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 DMRTC1Q5HYR2 192 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 ZNF813Q6ZN06 617 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 Q6ZS92 163 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 Q6ZSR3 168 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 NRARPQ7Z6K4 114 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 GLCCI1Q86VQ1 547 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 LRRC28Q86X40 367 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 UBE2J2Q8N2K1 259 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR51D1Q8NGF3 324 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 OR1F12Q8NHA8 337 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 CYYR1Q96J86 154 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 WACQ9BTA9 647 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 PRDM14Q9GZV8 571 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 NIPAL2Q9H841 368 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 PAQR5Q9NXK6 330 aaPredicted RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 CLCF1Q9UBD9 225 aa7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 MCTS1Q9ULC4 181 aaKnown RBP7.54□□□□□ -1.2
HMGN1P34-201ENST00000413023 MUC6Q6W4X9 2439 aa7.53□□□□□ -1.2
HMGN1P34-201ENST00000413023 MYO15AQ9UKN7 3530 aa7.53□□□□□ -1.2
HMGN1P34-201ENST00000413023 LOC100509620A0A075B734 347 aa7.53□□□□□ -1.2
HMGN1P34-201ENST00000413023 A0A096LPE4 126 aa7.53□□□□□ -1.2
HMGN1P34-201ENST00000413023 ARPC4-TTLL3A0A0A6YYG9 625 aa7.53□□□□□ -1.2
HMGN1P34-201ENST00000413023 IGKV1-9A0A0C4DH69 117 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms