RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 POMPQ9Y244 141 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 COMMD3-BMI1R4GMX3 469 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 TCRBV3S1A0A5B6 114 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 H0YL77 283 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 LIPAP38571 399 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 TNFAIP6P98066 277 aaPredicted RBP16.12■□□□□ 0.17
SF3A1-202ENST00000411423 SRSF2Q01130 221 aaKnown RBP16.12■□□□□ 0.17
SF3A1-202ENST00000411423 SLC36A3Q495N2 470 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 DNAL1Q4LDG9 190 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 ZNF771Q7L3S4 317 aaPredicted RBP16.12■□□□□ 0.17
SF3A1-202ENST00000411423 OR2T33Q8NG76 320 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 OR2Z1Q8NG97 314 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 ATF6BQ99941 703 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 C1QTNF5Q9BXJ0 243 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 CADM1Q9BY67 442 aaKnown RBP16.12■□□□□ 0.17
SF3A1-202ENST00000411423 ZNF665Q9H7R5 613 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 MED20Q9H944 212 aa16.12■□□□□ 0.17
SF3A1-202ENST00000411423 B4DSR2 109 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 CLDN25C9JDP6 229 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 F5H5K5 113 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 RAC2P15153 192 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 SPI1P17947 270 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 PRKACGP22612 351 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 TUBG1P23258 451 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 RGS6P49758 472 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 DVL1P1P54792 670 aaPredicted RBP16.11■□□□□ 0.17
SF3A1-202ENST00000411423 BNIP1Q12981 228 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 FLOT2Q14254 428 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 HFEQ30201 348 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 LINC01590Q5TEZ4 76 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 SPATA24Q86W54 205 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 OR2T4Q8NH00 348 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 ITLN1Q8WWA0 313 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 POP5Q969H6 163 aaKnown RBP16.11■□□□□ 0.17
SF3A1-202ENST00000411423 APOBEC3DQ96AK3 386 aaPredicted RBP16.11■□□□□ 0.17
SF3A1-202ENST00000411423 CDADC1Q9BWV3 514 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 TUBG2Q9NRH3 451 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 PDP1Q9P0J1 537 aaPredicted RBP16.11■□□□□ 0.17
SF3A1-202ENST00000411423 MXRA5Q9NR99 2828 aa16.11■□□□□ 0.17
SF3A1-202ENST00000411423 ARRDC5A6NEK1 342 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 FAM183AA6NL82 134 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 J3QW42 95 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 GSC2O15499 205 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 MLNRO43193 412 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 FKBP6O75344 327 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 DNAJC8O75937 253 aaPredicted RBP16.1■□□□□ 0.17
SF3A1-202ENST00000411423 IGHV2-5P01817 119 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 SRD5A1P18405 259 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 SLC25A1P53007 311 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 ACSM5Q6NUN0 579 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
SF3A1-202ENST00000411423 OR10AD1Q8NGE0 317 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 OR2AJ1Q8NGZ0 328 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 COG8Q96MW5 612 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 SIGLEC11Q96RL6 698 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 DIRC2Q96SL1 478 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 NTN4Q9HB63 628 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 CMC2Q9NRP2 79 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 TMEFF2Q9UIK5 374 aaPredicted RBP16.1■□□□□ 0.17
SF3A1-202ENST00000411423 BAIAP2Q9UQB8 552 aa16.1■□□□□ 0.17
SF3A1-202ENST00000411423 MSMBP08118 114 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 ZNF823P16415 610 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 CBX1P83916 185 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 GK2Q14410 553 aaPredicted RBP16.09■□□□□ 0.17
SF3A1-202ENST00000411423 PCK2Q16822 640 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 SNAI3Q3KNW1 292 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 ZMAT1Q5H9K5 638 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 CXXC5Q7LFL8 322 aaKnown RBP16.09■□□□□ 0.17
SF3A1-202ENST00000411423 DCXRQ7Z4W1 244 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 BHLHE23Q8NDY6 225 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 OR8G5Q8NG78 346 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 TMEM186Q96B77 213 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 OR2V2Q96R30 315 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 EGLN1Q9GZT9 426 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 DDX28Q9NUL7 540 aaKnown RBP16.09■□□□□ 0.17
SF3A1-202ENST00000411423 HIF1ANQ9NWT6 349 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 KCNG2Q9UJ96 466 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 DYSFO75923 2080 aa16.09■□□□□ 0.17
SF3A1-202ENST00000411423 ATRQ13535 2644 aa16.08■□□□□ 0.17
SF3A1-202ENST00000411423 IQCF6A8MYZ5 107 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 IFNA2P01563 188 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 IGHV2-70P01814 119 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 SPARCP09486 303 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 OTX1P32242 354 aaPredicted RBP16.08■□□□□ 0.16
SF3A1-202ENST00000411423 GRK5P34947 590 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 ENTPD1P49961 510 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 GK3PQ14409 553 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 ZNF283Q8N7M2 679 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 OR5L1Q8NGL2 311 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 ST7LQ8TDW4 575 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 G6PC2Q9NQR9 355 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
SF3A1-202ENST00000411423 IGHV3-64DA0A0J9YX35 117 aa16.07■□□□□ 0.16
SF3A1-202ENST00000411423 H3BN98 237 aa16.07■□□□□ 0.16
SF3A1-202ENST00000411423 M0R135 149 aa16.07■□□□□ 0.16
SF3A1-202ENST00000411423 ZNF593O00488 134 aaPredicted RBP16.07■□□□□ 0.16
SF3A1-202ENST00000411423 GNGT2O14610 69 aa16.07■□□□□ 0.16
SF3A1-202ENST00000411423 PHF1O43189 567 aaPredicted RBP16.07■□□□□ 0.16
SF3A1-202ENST00000411423 PLPP2O43688 288 aa16.07■□□□□ 0.16
SF3A1-202ENST00000411423 AVPP01185 164 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms