RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 A6NHS1 94 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 TRAPPC2LH3BP13 241 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 SPRY1O43609 319 aaPredicted RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 NXPH2O95156 264 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 ZFPL1O95159 310 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 BLVRBP30043 206 aaPredicted RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 CBX5P45973 191 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 SLC17A1Q14916 467 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 TAF9Q16594 264 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 MOGQ16653 247 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 HAGHLQ6PII5 290 aaPredicted RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 APH1BQ8WW43 257 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 NINJ1Q92982 152 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 MMP28Q9H239 520 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 METTL8Q9H825 291 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 SLC7A10Q9NS82 523 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 DEPPQ9NTK1 212 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 HIF3AQ9Y2N7 669 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 ANKHD1Q8IWZ3 2542 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 TMEM212A6NML5 194 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 BDKRB2P30411 391 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 HERV-K104P61576 105 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 GSG1Q2KHT4 349 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 GLIPR1L1Q6UWM5 242 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 H1FXQ92522 213 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 OPALINQ96PE5 141 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 PBOV1Q9GZY1 135 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 EVA1AQ9H8M9 152 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 MRPS28Q9Y2Q9 187 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 KIAA1671Q9BY89 1806 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 YES1P07947 543 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 CSRP1P21291 193 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 AP3S2P59780 193 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 C12orf73Q69YU5 71 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 NCCRP1Q6ZVX7 275 aaPredicted RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 TSEN54Q7Z6J9 526 aaKnown RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 CROCCP3Q8IVE0 287 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 NPEPL1Q8NDH3 523 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 PAQR8Q8TEZ7 354 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 KCNK15Q9H427 330 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 NIPAL2Q9H841 368 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 PRSS50Q9UI38 385 aa10.13□□□□□ -0.79
SNX13-202ENST00000409604 CHCHD2Q9Y6H1 151 aaPredicted RBP10.13□□□□□ -0.79
SNX13-202ENST00000409604 ALPK3Q96L96 1907 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 GATBO75879 557 aaKnown RBP10.12□□□□□ -0.79
SNX13-202ENST00000409604 PRSS3P35030 304 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 UBE2UQ5VVX9 321 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 SFXN4Q6P4A7 337 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 SLC25A19Q9HC21 320 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 NUP50Q9UKX7 468 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 LIPGQ9Y5X9 500 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 PINLYPA6NC86 204 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 S100GP29377 79 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 ATP1B3P54709 279 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 RNASE10Q5GAN6 216 aaKnown RBP10.12□□□□□ -0.79
SNX13-202ENST00000409604 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 TBC1D15Q8TC07 691 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 REEP6Q96HR9 211 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 SYT3Q9BQG1 590 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 GPR27Q9NS67 375 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 TAS2R5Q9NYW4 299 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 BHLHE40O14503 412 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 ZNF432O94892 652 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 IGHV3-13P01766 116 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 IGHV3-7P01780 117 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 CD82P27701 267 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 HTR2CP28335 458 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 TMPRSS3P57727 454 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 RIPPLY1Q0D2K3 151 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 TRAM1Q15629 374 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 EXOSC6Q5RKV6 272 aaKnown RBP10.12□□□□□ -0.79
SNX13-202ENST00000409604 SLC25A26Q70HW3 274 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 KCTD20Q7Z5Y7 419 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 CCDC54Q8NEL0 328 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 NFAM1Q8NET5 270 aaPredicted RBP10.12□□□□□ -0.79
SNX13-202ENST00000409604 SEMA6DQ8NFY4 1073 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 OTOSQ8NHW6 89 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 LRFN5Q96NI6 719 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 CACNG6Q9BXT2 260 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 ASF1BQ9NVP2 202 aa10.12□□□□□ -0.79
SNX13-202ENST00000409604 A0A1W2PQD3 144 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 MT-ND4P03905 459 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 TGM1P22735 817 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 OPRM1P35372 400 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 GLP1RP43220 463 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 SUCLG1P53597 346 aaKnown RBP10.11□□□□□ -0.79
SNX13-202ENST00000409604 WDR38Q5JTN6 314 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 ANKRD13BQ86YJ7 626 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 ANGPTL4Q9BY76 406 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 SRXN1Q9BYN0 137 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 TFP02787 698 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 SFTPBP07988 381 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 CA6P23280 308 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 FKBP2P26885 142 aaKnown RBP10.11□□□□□ -0.79
SNX13-202ENST00000409604 PPP5CP53041 499 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 PSPHP78330 225 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 EGR4Q05215 589 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 SLC25A35Q3KQZ1 300 aa10.11□□□□□ -0.79
SNX13-202ENST00000409604 SLC35D3Q5M8T2 416 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms