RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ACKR4Q9NPB9 350 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 HEYLQ9NQ87 328 aaPredicted RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 DUSP13Q9UII6 198 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 FAM166BA8MTA8 275 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 CSN1S1P47710 185 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 HMGA2P52926 109 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 PAQR6Q6TCH4 344 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 CNRIP1Q96F85 164 aaPredicted RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 OR5M11Q96RB7 305 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 SCN4AP35499 1836 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 NKX2-1P43699 371 aaPredicted RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 PELI1Q96FA3 418 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 OR8B4Q96RC9 309 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.16□□□□□ -0.14
GNE-202ENST00000396594 H0Y8X5 98 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 OR2J2O76002 312 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 PCBP4P57723 403 aaKnown RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 YRDCQ86U90 279 aaKnown RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 DTX3Q8N9I9 347 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 KDF1Q8NAX2 398 aaPredicted RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 C17orf47Q8NEP4 570 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 CMTM2Q8TAZ6 248 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 SLC7A6Q92536 515 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 MBD1Q9UIS9 605 aaPredicted RBP14.16□□□□□ -0.14
GNE-202ENST00000396594 TRAPPC4Q9Y296 219 aa14.16□□□□□ -0.14
GNE-202ENST00000396594 IFITM5A6NNB3 132 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 RAG2P55895 527 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 ERHP84090 104 aaKnown RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 SSX3Q99909 188 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 METTL17Q9H7H0 456 aaPredicted RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 WNK3Q9BYP7 1800 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 LGALS8O00214 317 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 USF2Q15853 346 aaPredicted RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 ZNF750Q32MQ0 723 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 TSLPQ969D9 159 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 MRPS24Q96EL2 167 aaKnown RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 CA10Q9NS85 328 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 E5RGE8 158 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 GLRA1P23415 457 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 FGF9P31371 208 aaPredicted RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 ARL16Q0P5N6 197 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 LCN10Q6JVE6 187 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 ANKRD37Q7Z713 158 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 COMTD1Q86VU5 262 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 COMMD1Q8N668 190 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 RPS10P5Q9NQ39 176 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 TAS2R4Q9NYW5 299 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 NSG2Q9Y328 171 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 CXCL13O43927 109 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 TSPAN7P41732 249 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 GPR12P47775 334 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 ZNF674Q2M3X9 581 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 OGFOD3Q6PK18 319 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 TEX29Q8N6K0 151 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 H1FXQ92522 213 aaKnown RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 ACOXLQ9NUZ1 547 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 MYEF2Q9P2K5 600 aaKnown RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 ASH2LQ9UBL3 628 aa14.15□□□□□ -0.14
GNE-202ENST00000396594 GDF2Q9UK05 429 aaPredicted RBP14.15□□□□□ -0.14
GNE-202ENST00000396594 RAB7AP51149 207 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 C9orf50Q5SZB4 431 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 MEX3DQ86XN8 651 aaKnown RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 OR1F12Q8NHA8 337 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 OR51B6Q9H340 312 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 IL5P05113 134 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 PTGER1P34995 402 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 LIPAP38571 399 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 EDDM3BP56851 147 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 OR1C1Q15619 314 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 VWA2Q5GFL6 755 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 TSEN54Q7Z6J9 526 aaKnown RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 OTOSQ8NHW6 89 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 PIGTQ969N2 578 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 SLC25A32Q9H2D1 315 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 TUBG2Q9NRH3 451 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 SLC17A2O00624 439 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 CDK2AP1O14519 115 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 C1QBP02746 253 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 SQSTM1Q13501 440 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 FOXB1Q99853 325 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ZFP64Q9NPA5 681 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 AMMECR1Q9Y4X0 333 aaPredicted RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 XKRY2A2RUG3 117 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ETV5P41161 510 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ETV1P50549 477 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ZNF766Q5HY98 468 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 NRARPQ7Z6K4 114 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 FJX1Q86VR8 437 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 LYSMD2Q8IV50 215 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 TMEM165Q9HC07 324 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 LRRC37AA6NMS7 1700 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 ENSAO43768 121 aaKnown RBP14.14□□□□□ -0.15
GNE-202ENST00000396594 AQP8O94778 261 aa14.14□□□□□ -0.15
GNE-202ENST00000396594 GP2P55259 537 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms