RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
GPC3-202ENST00000394299 EIF1BO60739 113 aaKnown RBP13.31□□□□□ -0.28
GPC3-202ENST00000394299 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
GPC3-202ENST00000394299 GDF1P27539 372 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 BTG1P62324 171 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 DYRK1AQ13627 763 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 MOGAT2Q3SYC2 334 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 TMEM164Q5U3C3 297 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 LINC00696Q6ZRV3 163 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 COMMD2Q86X83 199 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 TMEM123Q8N131 208 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 OR8B12Q8NGG6 310 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 SFXN2Q96NB2 322 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 OR10A4Q9H209 315 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 NUBP2Q9Y5Y2 271 aa13.31□□□□□ -0.28
GPC3-202ENST00000394299 SULT1B1O43704 296 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ALDOBP05062 364 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 CELA3AP09093 270 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 FSTP19883 344 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 CARD18P57730 90 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 CSNK2A1P68400 391 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 FOXO1Q12778 655 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 TMEM53Q6P2H8 277 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 FAM57BQ71RH2 274 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 AKAP1Q92667 903 aaKnown RBP eCLIP13.3□□□□□ -0.287e-9■■□□□ 13.8
GPC3-202ENST00000394299 TMEM54Q969K7 222 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 SCMH1Q96GD3 660 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ZNF845Q96IR2 970 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 FAM71F1Q96KD3 344 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 GHITMQ9H3K2 345 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 CNTD2Q9H8S5 307 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 CDV3Q9UKY7 258 aaKnown RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 URB1O60287 2271 aaKnown RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 ANKRD20A5PA0PJZ0 165 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 DHFRP00374 187 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 H2AFB2P0C5Z0 115 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ZNF17P17021 662 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 CX3CR1P49238 355 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 MRPS15P82914 257 aaKnown RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 ZNF813Q6ZN06 617 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
GPC3-202ENST00000394299 NOXA1Q86UR1 476 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 LYPD6Q86Y78 171 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 ZNF283Q8N7M2 679 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 OR4D10Q8NGI6 311 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 NKD1Q969G9 470 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 RHBDD3Q9Y3P4 386 aa13.3□□□□□ -0.28
GPC3-202ENST00000394299 F5H5K5 113 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 ACOT7O00154 380 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 TMEM127O75204 238 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 NEURL1O76050 574 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 HPXP02790 462 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 ITGA3P26006 1051 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 ENDOGQ14249 297 aaKnown RBP13.29□□□□□ -0.28
GPC3-202ENST00000394299 TGIF1Q15583 401 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 ST3GAL2Q16842 350 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 GSG1Q2KHT4 349 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 Q5BKY6 102 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 ZNF627Q7L945 461 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 HDDC2Q7Z4H3 204 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 OR11H7Q8NGC8 314 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 THRSPQ92748 146 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 DVL3Q92997 716 aaPredicted RBP13.29□□□□□ -0.28
GPC3-202ENST00000394299 NABP1Q96AH0 204 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
GPC3-202ENST00000394299 CYYR1Q96J86 154 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 GPR84Q9NQS5 396 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 DHHO43323 396 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 DBHP09172 617 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 PATE4P0C8F1 98 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 CXCL3P19876 107 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 RAC3P60763 192 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 PSMA6P60900 246 aaKnown RBP13.29□□□□□ -0.28
GPC3-202ENST00000394299 KCNMB1Q16558 191 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 RSPO1Q2MKA7 263 aaPredicted RBP13.29□□□□□ -0.28
GPC3-202ENST00000394299 BTN2A1Q7KYR7 527 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 OR10D3Q8NH80 312 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 GIMAP1Q8WWP7 306 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 FAM46BQ96A09 425 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 C20orf85Q9H1P6 137 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 DIABLOQ9NR28 239 aa13.29□□□□□ -0.28
GPC3-202ENST00000394299 FRYQ5TBA9 3013 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 CFPP27918 469 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 PCGF3Q3KNV8 242 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 LINC00303Q3SY05 128 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 DCAF10Q5QP82 559 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 RTN4RL2Q86UN3 420 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 OR8S1Q8NH09 359 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 ULBP2Q9BZM5 246 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 ZFP64Q9NPA5 681 aa13.28□□□□□ -0.28
GPC3-202ENST00000394299 FOXD3Q9UJU5 478 aaPredicted RBP13.28□□□□□ -0.28
GPC3-202ENST00000394299 A0A1B0GVI7 797 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms