RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PRSS12P56730 875 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 PROK1P58294 105 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 MAB21L1Q13394 359 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 KRR1Q13601 381 aaKnown RBP12.75□□□□□ -0.37
CHMP3-202ENST00000393773 CYLC2Q14093 348 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-202ENST00000393773 PDCD1Q15116 288 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF620Q6ZNG0 422 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 C19orf18Q8NEA5 215 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 DYRK2Q92630 601 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 ECSITQ9BQ95 431 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 RNF114Q9Y508 228 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 LHFPL6Q9Y693 200 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 A0A087WUU8 490 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 CENPVL3A0A0U1RRI6 287 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF879B4DU55 563 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 P2RY10O00398 339 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 XKRYO14609 159 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 GPR137BO60478 399 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 FAM20BO75063 409 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 IGHV4-59P01825 116 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 KDELR2P33947 212 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 HIST1H3AP68431 136 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 TRAM2Q15035 370 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 HIST2H3PS2Q5TEC6 136 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 HIST2H3AQ71DI3 136 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 C1QL4Q86Z23 238 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 GLB1L2Q8IW92 636 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 ACOT11Q8WXI4 607 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 TECTBQ96PL2 329 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 COQ7Q99807 217 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 SH3GL1Q99961 368 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 HDHD2Q9H0R4 259 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 WDR76Q9H967 626 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 TMCC3Q9ULS5 477 aa12.74□□□□□ -0.37
CHMP3-202ENST00000393773 COA3Q9Y2R0 106 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
CHMP3-202ENST00000393773 PLXNB1O43157 2135 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 SLC16A7O60669 478 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 KHDRBS3O75525 346 aaKnown RBP12.73□□□□□ -0.37
CHMP3-202ENST00000393773 FCN3O75636 299 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 TOX4O94842 621 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 FPR3P25089 353 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 SDHAP31040 664 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 CD200P41217 278 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 NPY4RP50391 375 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 SELENOWP63302 87 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 TAF9Q16594 264 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 KRTAP27-1Q3LI81 207 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 ZBED5Q49AG3 693 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 COQ5Q5HYK3 327 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 PRAMEF6Q5VXH4 476 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 TMPRSS11FQ6ZWK6 438 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 VTCN1Q7Z7D3 282 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 LDLRAD3Q86YD5 345 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 CELF2-AS1Q8N7Q2 184 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 GATAD2BQ8WXI9 593 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-202ENST00000393773 SIRPDQ9H106 197 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 NMNAT1Q9HAN9 279 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-202ENST00000393773 ACOXLQ9NUZ1 547 aa12.73□□□□□ -0.37
CHMP3-202ENST00000393773 MRASO14807 208 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 IFNW1P05000 195 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 IFNA8P32881 189 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 GK2Q14410 553 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-202ENST00000393773 MPPED2Q15777 294 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 RSPO1Q2MKA7 263 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-202ENST00000393773 TBPL2Q6SJ96 375 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF730Q6ZMV8 503 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 MBOAT2Q6ZWT7 520 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 RNF113BQ8IZP6 322 aaKnown RBP12.72□□□□□ -0.37
CHMP3-202ENST00000393773 DYDC1Q8WWB3 177 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 ERGIC1Q969X5 290 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 WDFY2Q96P53 400 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 FNDC11Q9BVV2 318 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-202ENST00000393773 RERGLQ9H628 205 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 NRIP3Q9NQ35 241 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 TMEM100Q9NV29 134 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 POLR1DQ9Y2S0 133 aa12.72□□□□□ -0.37
CHMP3-202ENST00000393773 IGHV1-69DA0A0B4J2H0 117 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 A0A0U1RQK1 487 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 DCTN6O00399 190 aa12.71□□□□□ -0.37
CHMP3-202ENST00000393773 IGHV1-69P01742 117 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms