RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 DLL3Q9NYJ7 618 aa13.13□□□□□ -0.31
UBA1-202ENST00000377269 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
UBA1-202ENST00000377269 PADI1Q9ULC6 663 aa13.13□□□□□ -0.31
UBA1-202ENST00000377269 PTRH2Q9Y3E5 179 aaKnown RBP13.13□□□□□ -0.31
UBA1-202ENST00000377269 GGT3PA6NGU5 568 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 F8VVB4 439 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 F8VWA3 439 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 PHYHO14832 338 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 GYPBP06028 91 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 MAP3K8P41279 467 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SLC37A1P57057 533 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 TAF13Q15543 124 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
UBA1-202ENST00000377269 WDR88Q6ZMY6 472 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 PAQR8Q8TEZ7 354 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 POM121Q96HA1 1249 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 VSTM2LQ96N03 204 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 LMF1Q96S06 567 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 UPB1Q9UBR1 384 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 ZNF281Q9Y2X9 895 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 AKAP13Q12802 2813 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 OR2AT4A6NND4 320 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 CD74P04233 296 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 GTF2F2P13984 249 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 TCN2P20062 427 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 PPT1P50897 306 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 ZNF136P52737 540 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SCAND1P57086 179 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 PJVKQ0ZLH3 352 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
UBA1-202ENST00000377269 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 FIGNL1Q6PIW4 674 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 NPSR1Q6W5P4 371 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 TMPRSS11FQ6ZWK6 438 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SLC30A7Q8NEW0 376 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 SNX33Q8WV41 574 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 RNF141Q8WVD5 230 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 ZPBPQ9BS86 351 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 NRSN2Q9GZP1 204 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 GNG8Q9UK08 70 aa13.12□□□□□ -0.31
UBA1-202ENST00000377269 C9J4A7 227 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 GPX4P36969 197 aaPredicted RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 PMELP40967 661 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 GFOD2Q3B7J2 385 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 TEX30Q5JUR7 227 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 NKAPLQ5M9Q1 402 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 ZAR1Q86SH2 424 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 TMPRSS12Q86WS5 348 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 WDSUB1Q8N9V3 476 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 METTL21AQ8WXB1 218 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 RGP1Q92546 391 aaPredicted RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 HIST1H2BAQ96A08 127 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 WDR77Q9BQA1 342 aaPredicted RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 FRYQ5TBA9 3013 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 A0A1W2PPE3 182 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CDC14CA4D256 554 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 MASP2O00187 686 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CLN5O75503 358 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CD3DP04234 171 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CT45A8P0DMV1 189 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CT45A9P0DMV2 189 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 HLA-GP17693 338 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 SDHAP31040 664 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 GALNSP34059 522 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 PSMB10P40306 273 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 CAPZA1P52907 286 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 GABREP78334 506 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 NAAAQ02083 359 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 SSBP1Q04837 148 aaKnown RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 GGTLC2Q14390 218 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CT45A2Q5DJT8 189 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 TMEM200AQ86VY9 491 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 COX18Q8N8Q8 333 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 OR13C2Q8NGS9 318 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CT55Q8WUE5 264 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 PPP1R1CQ8WVI7 109 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 CNN2Q99439 309 aaKnown RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
UBA1-202ENST00000377269 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
UBA1-202ENST00000377269 WDR54Q9H977 334 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms