RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 HSD11B2P80365 405 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 PRDX1Q06830 199 aaKnown RBP18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 TDGQ13569 410 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 WDR38Q5JTN6 314 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 ZAR1Q86SH2 424 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 TRAPPC6BQ86SZ2 158 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 AVL9Q8NBF6 648 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 RELTQ969Z4 430 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 NTNG2Q96CW9 530 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 LRRC3BQ96PB8 259 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 SRA1Q9HD15 236 aaKnown RBP18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 UBQLN4Q9NRR5 601 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 LAMP5Q9UJQ1 280 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 WIPF3A6NGB9 483 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 CRABP1P29762 137 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 NUTF2P61970 127 aaKnown RBP18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 BIKQ13323 160 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 SLC9A3R2Q15599 337 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF674Q2M3X9 581 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 HIST2H3AQ71DI3 136 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 HIST3H2BBQ8N257 126 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF610Q8N9Z0 462 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 PPP1R14AQ96A00 147 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 GALNT14Q96FL9 552 aa18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 APOBEC3BQ9UH17 382 aaKnown RBP18.46■□□□□ 0.55
TMEFF1-201ENST00000374879 HIST1H2BKO60814 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BJP06899 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 SFTPBP07988 381 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 ADH5P11766 374 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BOP23527 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BBP33778 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BDP58876 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BCP62807 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 ERV3-1Q14264 604 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST2H2BEQ16778 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 C14orf28Q4W4Y0 310 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF529Q6P280 563 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 CDC20BQ86Y33 519 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BHQ93079 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 POM121Q96HA1 1249 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 OR10C1Q96KK4 312 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 CMKLR1Q99788 373 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BNQ99877 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 HIST1H2BMQ99879 126 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 GDE1Q9NZC3 331 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 GPR34Q9UPC5 381 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 A0A087WV62 115 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 F13BP05160 661 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 OR13C7P0DN81 318 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 PAX1P15863 534 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 RAB1AP62820 205 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 BTN3A2P78410 334 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 TOMM34Q15785 309 aaPredicted RBP18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF765Q7L2R6 523 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 GRASPQ7Z6J2 395 aaPredicted RBP18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 COX18Q8N8Q8 333 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 OR2A1Q8NGT9 310 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 CMBLQ96DG6 245 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 XIRP2A4UGR9 3374 aa18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
TMEFF1-201ENST00000374879 PRRT4C9JH25 899 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 ARPC3O15145 178 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 DNAJB6O75190 326 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 MPZP25189 248 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 LRRC69Q6ZNQ3 347 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 FOXRED2Q8IWF2 684 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 MRPL43Q8N983 215 aaKnown RBP18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 C4orf45Q96LM5 186 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 JSRP1Q96MG2 331 aaPredicted RBP18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 KXD1Q9BQD3 176 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 KCNK6Q9Y257 313 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 ZNF727A8MUV8 499 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 RPL36A-HNRNPH2H7BZ11 118 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 PPP1R2P9O14990 202 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 CST4P01036 141 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 HCKP08631 526 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 FABP4P15090 132 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 G0S2P27469 103 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 EMDP50402 254 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 S100A10P60903 97 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 TCEAL6Q6IPX3 200 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 DPY19L4Q7Z388 723 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 AMZ2Q86W34 360 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 RCBTB1Q8NDN9 531 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 OR9K2Q8NGE7 335 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 OR6N2Q8NGY6 317 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 LCN9Q8WX39 176 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 GNRHR2Q96P88 292 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 DCBLD2Q96PD2 775 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 SLC22A13Q9Y226 551 aa18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 PUS1Q9Y606 427 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMEFF1-201ENST00000374879 DCDC2BA2VCK2 349 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 TAAR5O14804 337 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 HKR1P10072 659 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 C5AR1P21730 350 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 ACAA2P42765 397 aaKnown RBP18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 DPTQ07507 201 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 DNLZQ5SXM8 178 aa18.43■□□□□ 0.54
TMEFF1-201ENST00000374879 OTPQ5XKR4 325 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms