RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GHSRQ92847 366 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 PIK3IP1Q96FE7 263 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 PGLYRP3Q96LB9 341 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 NAA11Q9BSU3 229 aaPredicted RBP8.73□□□□□ -1.01
TPM3-210ENST00000368530 GSX2Q9BZM3 304 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 MMP27Q9H306 513 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 RNF122Q9H9V4 155 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 FANCFQ9NPI8 374 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 SLCO1C1Q9NYB5 712 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 ELOVL5Q9NYP7 299 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 RASD1Q9Y272 281 aa8.73□□□□□ -1.01
TPM3-210ENST00000368530 A0A1W2PPK0 400 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ZNF726A6NNF4 738 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 OGG1O15527 345 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 EIF1BO60739 113 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 WNT11O96014 354 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 IL1AP01583 271 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 TACSTD2P09758 323 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 PGA4P0DJD7 388 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 PGA3P0DJD8 388 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 PAX1P15863 534 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ZNF823P16415 610 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ALOX5APP20292 161 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 CALRP27797 417 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 FGF9P31371 208 aaPredicted RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 CAPZA2P47755 286 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 EIF1AXP47813 144 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 BLVRAP53004 296 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ZNF239Q16600 458 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 FAM27D1Q5T7N8 215 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 LIPNQ5VXI9 398 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 OR2A2Q6IF42 318 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 RPL22L1Q6P5R6 122 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 LRRN1Q6UXK5 716 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 LINC00346Q8IVM7 164 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 OR9K2Q8NGE7 335 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 OTOSQ8NHW6 89 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 SPATA3Q8NHX4 192 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ROBO4Q8WZ75 1007 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 HSD17B8Q92506 261 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 HTRA1Q92743 480 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 BORCS5Q969J3 196 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 ZNF775Q96BV0 537 aaPredicted RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 SMIM19Q96E16 107 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 PERPQ96FX8 193 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 RBP7Q96R05 134 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 MNTQ99583 582 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 CCL19Q99731 98 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 PDCD1LG2Q9BQ51 273 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 OCSTAMPQ9BR26 566 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 NXF2Q9GZY0 626 aaKnown RBP8.72□□□□□ -1.01
TPM3-210ENST00000368530 UBTD1Q9HAC8 227 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 SMURF1Q9HCE7 757 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 TMEM14AQ9Y6G1 99 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
TPM3-210ENST00000368530 SLC22A20A6NK97 555 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 CLDN25C9JDP6 229 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 C16orf97H3BN30 126 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 PHYHO14832 338 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SMAD9O15198 467 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 CNOT4O95628 575 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 ABHD16AO95870 558 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 GAAP10253 952 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 CDAP32320 146 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 S100A5P33763 92 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 PTH2RP49190 550 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 CARD18P57730 90 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 NANOS3P60323 173 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 H3F3AP84243 136 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 ODF4Q2M2E3 257 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 ZNF829Q3KNS6 432 aaPredicted RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 ACSM3Q53FZ2 586 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SLC18B1Q6NT16 456 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 C16orf87Q6PH81 154 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 CORO6Q6QEF8 472 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 MFSD4AQ8N468 514 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 CNEP1R1Q8N9A8 125 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SLC26A10Q8NG04 563 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 OR10H5Q8NGA6 315 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 OR6X1Q8NH79 312 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 OR10D3Q8NH80 312 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 OR2V1Q8NHB1 315 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 S100ZQ8WXG8 99 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SLC25A46Q96AG3 418 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SLC25A44Q96H78 314 aaPredicted RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 ZNF385AQ96PM9 386 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 COQ7Q99807 217 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 MED18Q9BUE0 208 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 MRPL13Q9BYD1 178 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 PPIL3Q9H2H8 161 aaKnown RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 KCNN2Q9H2S1 579 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 SEC61A2Q9H9S3 476 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 ELOVL3Q9HB03 270 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 HMG20AQ9NP66 347 aa8.71□□□□□ -1.01
TPM3-210ENST00000368530 ZNF701Q9NV72 531 aaPredicted RBP8.71□□□□□ -1.01
TPM3-210ENST00000368530 GTF2A1LQ9UNN4 478 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms