RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
PCDH11X-202ENST00000361655 TP53BP1Q12888 1972 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-202ENST00000361655 LINC01387J3KSC0 135 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF701M0R085 212 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZIC3O60481 467 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GATBO75879 557 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CCNKO75909 580 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 AGFG2O95081 481 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CLPSP04118 112 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SERPINA5P05154 406 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GSTT2BP0CG30 244 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 UBCP0CG48 685 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PCMT1P22061 227 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MST1P26927 711 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 HTR2CP28335 458 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 NHLH1Q02575 133 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CTF1Q16619 201 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SLC25A35Q3KQZ1 300 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ELFN2Q5R3F8 820 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SFRP5Q5T4F7 317 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 LAIR2Q6ISS4 152 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SLC22A25Q6T423 547 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF584Q8IVC4 421 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SYS1Q8N2H4 156 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 POC1BQ8TC44 478 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GCDHQ92947 438 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CPNE2Q96FN4 548 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 AMELYQ99218 206 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GINS4Q9BRT9 223 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SELENOIQ9C0D9 397 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF552Q9H707 407 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 FKBP14Q9NWM8 211 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 DNAJB11Q9UBS4 358 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 KLHDC2Q9Y2U9 406 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SPEF1Q9Y4P9 236 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MEX3AA1L020 520 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CYC1P08574 325 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF16P17020 682 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PRSS3P35030 304 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 THBS2P35442 1172 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 RIPPLY1Q0D2K3 151 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 TBC1D28Q2M2D7 210 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF684Q5T5D7 378 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 LIN54Q6MZP7 749 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ACOT12Q8WYK0 555 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 YIPF6Q96EC8 236 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 RNF170Q96K19 258 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 FAM117AQ9C073 453 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SIAEQ9HAT2 523 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 DYNLRB1Q9NP97 96 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SLC7A10Q9NS82 523 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 TP53TG5Q9Y2B4 290 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 R4GMQ9 66 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PRR14LQ5THK1 2151 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 A0A1W2PQ09 198 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF850A8MQ14 1090 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ANGPTL7O43827 346 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SULT1C4O75897 302 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 WISP1O95388 367 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PMS2P2O95744 297 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 AMY2BP19961 511 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 TNFSF10P50591 281 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ATP1B3P54709 279 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 EGR3Q06889 387 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PMPCAQ10713 525 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SNTB1Q13884 538 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PDCD1Q15116 288 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 RNPS1Q15287 305 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PCGF3Q3KNV8 242 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 XKRXQ6PP77 449 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GLIPR1L1Q6UWM5 242 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CCBE1Q6UXH8 406 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 FOXRED2Q8IWF2 684 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ARHGEF39Q8N4T4 335 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNF441Q8N8Z8 693 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SEMA6DQ8NFY4 1073 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 OR1F12Q8NHA8 337 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ZNRF4Q8WWF5 429 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 REEP6Q96HR9 211 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MED28Q9H204 178 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 TP63Q9H3D4 680 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MRPS28Q9Y2Q9 187 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SIRT4Q9Y6E7 314 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 DVL2O14641 736 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 ORC5O43913 435 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CRYAAP02489 173 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PTHLHP12272 177 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GABRA2P47869 451 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 PTH2RP49190 550 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CD83Q01151 205 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 GSG1Q2KHT4 349 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 CXorf67Q86X51 503 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 SPACA3Q8IXA5 215 aa4.87□□□□□ -1.63
PCDH11X-202ENST00000361655 MKXQ8IYA7 352 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms