RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
GGPS1-202ENST00000358966 WNT5BQ9H1J7 359 aa11.27□□□□□ -0.61
GGPS1-202ENST00000358966 TUBAL3A6NHL2 446 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 INMT-MINDY4F8WBC2 141 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 M0R233 179 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF208O43345 1280 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 KDM4BO94953 1096 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 IL1AP01583 271 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 FGF2P09038 288 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 FBP1P09467 338 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CD53P19397 219 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 RPS11P62280 158 aaKnown RBP eCLIP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ADAM8P78325 824 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 EMC4Q5J8M3 183 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 NHLRC3Q5JS37 347 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLC16A9Q7RTY1 509 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CDC20BQ86Y33 519 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF248Q8NDW4 579 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 OR51A4Q8NGJ6 313 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 RGP1Q92546 391 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SMIM19Q96E16 107 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLC25A18Q9H1K4 315 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 MED28Q9H204 178 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLCO1C1Q9NYB5 712 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CLEC4AQ9UMR7 237 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 GTF2A1LQ9UNN4 478 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SULT2B1O00204 365 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 TNFSF11O14788 317 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 RAB40ALP0C0E4 278 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 COX5BP10606 129 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 PRKAR1AP10644 381 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CDAP32320 146 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ACTA2P62736 377 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ACTG2P63267 376 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLC25A35Q3KQZ1 300 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ZFP82Q8N141 532 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 PFDN5Q99471 154 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 ALKBH4Q9NXW9 302 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 MYEF2Q9P2K5 600 aaKnown RBP11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
GGPS1-202ENST00000358966 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 EIF1AYO14602 144 aaKnown RBP11.25□□□□□ -0.61
GGPS1-202ENST00000358966 TRAPPC6AO75865 159 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SERPINA7P05543 415 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 FAM157BP0CG42 384 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SPP1P10451 314 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 NDUFB7P17568 137 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 ALOX5APP20292 161 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SOX2P48431 317 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 DCAF10Q5QP82 559 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 ZNF684Q5T5D7 378 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 TMEM225Q6GV28 225 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 OR11H7Q8NGC8 314 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 NKD1Q969G9 470 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 WDFY2Q96P53 400 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 RP1L1Q8IWN7 2480 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-202ENST00000358966 APC2O95996 2303 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 LRRC3CA6NJW4 275 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 UPK3AO75631 287 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 RGS11O94810 467 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 P04436 131 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 CELA3AP09093 270 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 CBR1P16152 277 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 BDH1Q02338 343 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SSX2Q16385 188 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 WIPI1Q5MNZ9 446 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-202ENST00000358966 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 MZT2BQ6NZ67 158 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 C19orf18Q8NEA5 215 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 ZC3HAV1LQ96H79 300 aaKnown RBP11.25□□□□□ -0.61
GGPS1-202ENST00000358966 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 NKX6-2Q9C056 277 aaPredicted RBP11.25□□□□□ -0.61
GGPS1-202ENST00000358966 DNTTIP1Q9H147 329 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 LRFN1Q9P244 771 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 FBXL3Q9UKT7 428 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 PCDHGB7Q9Y5F8 929 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 ZZEF1O43149 2961 aa11.25□□□□□ -0.61
GGPS1-202ENST00000358966 AIPO00170 330 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 ABHD16AO95870 558 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 NMBP08949 121 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 EDN3P14138 238 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 CD96P40200 585 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 EIF2S3P41091 472 aaKnown RBP11.24□□□□□ -0.61
GGPS1-202ENST00000358966 CYB561P49447 251 aa11.24□□□□□ -0.61
GGPS1-202ENST00000358966 DEFA6Q01524 100 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms