RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ASB17Q8WXJ9 295 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 SAT2Q96F10 170 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF426Q9BUY5 554 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 POFUT1Q9H488 388 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 COMMD9Q9P000 198 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 GNG8Q9UK08 70 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 ADAM18Q9Y3Q7 739 aa8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-202ENST00000358207 UNC13CQ8NB66 2214 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 YLPM1P49750 1951 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 A0A1W2PQF6 199 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 NKX6-3A6NJ46 265 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 J3QRE1 110 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 SAP18O00422 153 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 SOCS6O14544 535 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 EPHA1P21709 976 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 IFNGR2P38484 337 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 WNT5AP41221 380 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 SUCLG1P53597 346 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 NAAAQ02083 359 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 RHEBQ15382 184 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 HMGN3Q15651 99 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 CLEC12AQ5QGZ9 265 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 ENPP7Q6UWV6 458 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 FCRLAQ7L513 359 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 INO80EQ8NBZ0 244 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TSTD1Q8NFU3 115 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR4S1Q8NGB4 309 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TERB2Q8NHR7 220 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 RNASEH2CQ8TDP1 164 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 RCC1LQ96I51 464 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 PGLYRP3Q96LB9 341 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 SYT4Q9H2B2 425 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 RNF24Q9Y225 148 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TEX13DA0A0J9YY54 714 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 LNP1A1A4G5 178 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZC3H12DA2A288 527 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 K7EP13 123 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 CDX4O14627 284 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 BDH1Q02338 343 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 PIN1Q13526 163 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 ELOBQ15370 118 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 RPS26P11Q5JNZ5 115 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 MRM1Q6IN84 353 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMED4Q7Z7H5 227 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 BIVMQ86UB2 503 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 EID2Q8N6I1 236 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMEM99Q8N816 258 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR1L6Q8NGR2 347 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR14K1Q8NGZ2 314 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 CCL4L1Q8NHW4 92 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 LMF1Q96S06 567 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 GFI1Q99684 422 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 PLEKHA2Q9HB19 425 aa8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF106Q9H2Y7 1883 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-202ENST00000358207 PLPP2O43688 288 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 RAMP1O60894 148 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 SLC2A10O95528 541 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 ERCC1P07992 297 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 NDUFV2P19404 249 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 DPP4P27487 766 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 BMI1P35226 326 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PCGF3Q3KNV8 242 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 C4orf17Q53FE4 359 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PRAMEF8Q5VWM4 474 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PRAMEF7Q5VXH5 474 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 LCTLQ6UWM7 567 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 MRGPREQ86SM8 312 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 LYG1Q8N1E2 194 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 C11orf42Q8N5U0 333 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR51G2Q8NGK0 314 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR5AR1Q8NGP9 310 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 OR4K15Q8NH41 348 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 MRGPRDQ8TDS7 321 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 HAS2Q92819 552 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 TSACCQ96A04 125 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 EXO5Q9H790 373 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 MYOTQ9UBF9 498 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF223Q9UK11 482 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 CYP8B1Q9UNU6 501 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 SH2B3Q9UQQ2 575 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 TMEM131Q92545 1883 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 DHRS7CA6NNS2 312 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 UMAD1C9J7I0 102 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 ZNF208O43345 1280 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PRAMEF4O60810 478 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 GGCTO75223 188 aaKnown RBP8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 STK16O75716 305 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 VAMP5O95183 116 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 RAB6AP20340 208 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 CDK2P24941 298 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 AK4P27144 223 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PSMB5P28074 263 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 PRAMEF9Q5VWM5 478 aa8.36□□□□□ -1.07
SMARCAL1-202ENST00000358207 TRIM40Q6P9F5 258 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms