RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ATF6BQ99941 703 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SRRQ9GZT4 340 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 HRH3Q9Y5N1 445 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 SLCO1B1Q9Y6L6 691 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 CROCCQ5TZA2 2017 aa10.67□□□□□ -0.7
COL9A1-202ENST00000357250 LMO7DNF2Z398 122 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 C21orf58P58505 322 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SNTB1Q13884 538 aaKnown RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 OR2G2Q8NGZ5 317 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 OR51E1Q8TCB6 317 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 LAMP3Q9UQV4 416 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 PAQR6Q6TCH4 344 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CD300LDQ6UXZ3 194 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 RBMXL3Q8N7X1 1067 aaKnown RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CCL4L1Q8NHW4 92 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ADAM10O14672 748 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ICOSLGO75144 302 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 NKX2-2O95096 273 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SLC2A10O95528 541 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 APOA2P02652 100 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ALOX5APP20292 161 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 HMGA2P52926 109 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 DHODHQ02127 395 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CLINT1Q14677 625 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CMTM4Q8IZR5 234 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 EXD3Q8N9H8 876 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SARAFQ96BY9 339 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ARSGQ96EG1 525 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ZMAT3Q9HA38 289 aaKnown RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SPAG17Q6Q759 2223 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 SPTY2D1-AS1A0A0U1RR47 76 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 E5RGE8 158 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 G3V3Y1 287 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 ARPC3O15145 178 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 IL5P05113 134 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 IGFBP1P08833 259 aaPredicted RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 RAG2P55895 527 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CLN3Q13286 438 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 TMEM196Q5HYL7 178 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 PXDC1Q5TGL8 231 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 TCTE3Q8IZS6 198 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 PP6455Q8WZ26 134 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 EID2BQ96D98 161 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 NSG2Q9Y328 171 aa10.66□□□□□ -0.7
COL9A1-202ENST00000357250 PCYT1BQ9Y5K3 369 aaPredicted RBP10.66□□□□□ -0.7
COL9A1-202ENST00000357250 A0A087WUJ7 227 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ANKUB1A6NFN9 424 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 EPXP11678 715 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 KIR2DL3P43628 341 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 SFTPA1Q8IWL2 248 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 OR51F2Q8NH61 342 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ST7LQ8TDW4 575 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 GPX8Q8TED1 209 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 THOC3Q96J01 351 aaKnown RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 WDFY2Q96P53 400 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF391Q9UJN7 358 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 SERPINE3A8MV23 424 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 SLC17A2O00624 439 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 SH2D1BO14796 132 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 TXNL1O43396 289 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 OIP5O43482 229 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 XRCC3O43542 346 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 OR8U8P0C7N1 319 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 RAB4AP20338 218 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 PPP2CBP62714 309 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 PPP2CAP67775 309 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 C2orf76Q3KRA6 126 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ARRDC1Q8N5I2 433 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 OR10R2Q8NGX6 335 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 APH1BQ8WW43 257 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 GPR84Q9NQS5 396 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 K7EQM0 130 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 PRICKLE3O43900 615 aaPredicted RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 H2AFB1P0C5Y9 115 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 SOX18P35713 384 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 TAGLN2P37802 199 aaKnown RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 YBX1P67809 324 aaKnown RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 PHLDA2Q53GA4 152 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 H2BFWTQ7Z2G1 175 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 FBXL6Q8N531 539 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 OR2G3Q8NGZ4 309 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 IFI44Q8TCB0 444 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 EMC6Q9BV81 110 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 WWTR1Q9GZV5 400 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF629Q9UEG4 869 aaPredicted RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
COL9A1-202ENST00000357250 A4GNTQ9UNA3 340 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 B9D1Q9UPM9 204 aa10.65□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF891A8MT65 544 aaPredicted RBP10.65□□□□□ -0.71
COL9A1-202ENST00000357250 CBR3O75828 277 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 MBP02144 154 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 KIAA0040Q15053 153 aa10.65□□□□□ -0.71
COL9A1-202ENST00000357250 OR2AK2Q8NG84 335 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms