RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 CCR9P51686 369 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 SH3BGRP55822 239 aaPredicted RBP11.09□□□□□ -0.63
CT55-202ENST00000344129 PSMA6P60900 246 aaKnown RBP11.09□□□□□ -0.63
CT55-202ENST00000344129 SLC36A2Q495M3 483 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 YIF1BQ5BJH7 314 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 ZMAT1Q5H9K5 638 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 PABPC1L2AQ5JQF8 200 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 FAM57BQ71RH2 274 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 ZGRF1Q86YA3 2104 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 KCNJ15Q99712 375 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 SNTG1Q9NSN8 517 aa11.09□□□□□ -0.63
CT55-202ENST00000344129 ACACBO00763 2458 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 CIB4A0PJX0 185 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 C5orf63A6NC05 138 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 SC5DO75845 299 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 SERPINA3P01011 423 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 CRHP06850 196 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 DCTDP32321 178 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 SLC6A9P48067 706 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 MMP16P51512 607 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 TBRG1Q3YBR2 411 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 RHOUQ7L0Q8 258 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 CXorf67Q86X51 503 aaPredicted RBP11.08□□□□□ -0.64
CT55-202ENST00000344129 ZNF433Q8N7K0 673 aaPredicted RBP11.08□□□□□ -0.64
CT55-202ENST00000344129 CPEB3Q8NE35 698 aaKnown RBP11.08□□□□□ -0.64
CT55-202ENST00000344129 CNTNAP3BQ96NU0 1288 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 COQ7Q99807 217 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 HDHD2Q9H0R4 259 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 TPK1Q9H3S4 243 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 NIPAL2Q9H841 368 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
CT55-202ENST00000344129 TRGV8A0A0C4DH27 118 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 A0A0G2JNJ9 132 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 OR6C6A6NF89 314 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 E9PLN8 166 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 M0R135 149 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 NCR1O76036 304 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 TTRP02766 147 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 OCM2P0CE71 109 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 GALP22466 123 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 CTSSP25774 331 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 CAV3P56539 151 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 RAB1AP62820 205 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 HGFACQ04756 655 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 GFOD2Q3B7J2 385 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 LUZP2Q86TE4 346 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 GABRG1Q8N1C3 465 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 OR8B12Q8NGG6 310 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 TSEN15Q8WW01 171 aaKnown RBP11.07□□□□□ -0.64
CT55-202ENST00000344129 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 ZNF799Q96GE5 643 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 ZFP3Q96NJ6 502 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 NOX4Q9NPH5 578 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 Q9UFV3 132 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 PMF1-BGLAPU3KQ54 211 aa11.07□□□□□ -0.64
CT55-202ENST00000344129 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
CT55-202ENST00000344129 TRBV5-5A0A0J9YX44 114 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ANKRD61A6NGH8 418 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 CASKO14936 926 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 PIN1P1O15428 100 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 LMX1BO60663 402 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 COX5AP20674 150 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 BMP5P22003 454 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 CRYGSP22914 178 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 TGFBR3Q03167 851 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 GABRA6Q16445 453 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 EIF2S3LQ2VIR3 472 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 Q499Y3 187 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 TMEM53Q6P2H8 277 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 UNQ9370/PRO34162Q6UXP9 181 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 MDP1Q86V88 176 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ELMOD2Q8IZ81 293 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ALDH16A1Q8IZ83 802 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ST6GALNAC3Q8NDV1 305 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 OR51E1Q8TCB6 317 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 GPR148Q8TDV2 347 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 DERL3Q96Q80 235 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 SFXN3Q9BWM7 321 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 NUFIP1Q9UHK0 495 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 TPRP12270 2363 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 TBX1O43435 398 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 GATBO75879 557 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 UBL3O95164 117 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 CNOT4O95628 575 aaKnown RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 UCHL1P09936 223 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 CCL2P13500 99 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 OTX1P32242 354 aaPredicted RBP11.06□□□□□ -0.64
CT55-202ENST00000344129 TPTEP56180 551 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 ECH1Q13011 328 aa11.06□□□□□ -0.64
CT55-202ENST00000344129 HNRNPA0Q13151 305 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms