RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 OR2A5Q96R48 311 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 PRO1933Q9H354 126 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
CLCN1-201ENST00000343257 COLEC10Q9Y6Z7 277 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 CHD7Q9P2D1 2997 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 H0YGG7 62 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 SDCBPO00560 298 aaPredicted RBP13.32□□□□□ -0.28
CLCN1-201ENST00000343257 C1QL1O75973 258 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 SCGB1D2O95969 90 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 CEACAM5P06731 702 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 FCGR3AP08637 254 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 ARF3P61204 181 aaPredicted RBP13.32□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 FAM166AQ6J272 317 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 RNF144BQ7Z419 303 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 SLAMF9Q96A28 289 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
CLCN1-201ENST00000343257 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 WIF1Q9Y5W5 379 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 P2RY10O00398 339 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM127O75204 238 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 TSPAN15O95858 294 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 IFNA2P01563 188 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 CEBPBP17676 345 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 SSBP1Q04837 148 aaKnown RBP13.32□□□□□ -0.28
CLCN1-201ENST00000343257 CLEC18BQ6UXF7 455 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 LINC00346Q8IVM7 164 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 KDM8Q8N371 416 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 OR4K15Q8NH41 348 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 NICN1Q9BSH3 213 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 PDE7BQ9NP56 450 aa13.32□□□□□ -0.28
CLCN1-201ENST00000343257 IGHV2-5P01817 119 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 CD5P06127 495 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 KIAA0141Q14154 515 aaPredicted RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ACTBL2Q562R1 376 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 RSPRY1Q96DX4 576 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 OR8B4Q96RC9 309 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF587Q96SQ5 575 aaPredicted RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 OCSTAMPQ9BR26 566 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 TMPRSS5Q9H3S3 457 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 CNTD2Q9H8S5 307 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 MYOZ1Q9NP98 299 aaPredicted RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 PUS1Q9Y606 427 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 SPACA6W5XKT8 324 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 SZT2Q5T011 3432 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF729A6NN14 1252 aaPredicted RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 MFNGO00587 321 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 KNG1P01042 644 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 CD63P08962 238 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 HPGDP15428 266 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 SCAND1P57086 179 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 NAAAQ02083 359 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 CD226Q15762 336 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ANKRD55Q3KP44 614 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 MIDNQ504T8 468 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 PSRC1Q6PGN9 363 aaPredicted RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 FIGLAQ6QHK4 219 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF679Q8IYX0 411 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 PNLDC1Q8NA58 520 aaKnown RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 ASB17Q8WXJ9 295 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 RBM18Q96H35 190 aaKnown RBP13.31□□□□□ -0.28
CLCN1-201ENST00000343257 HHIPL1Q96JK4 782 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 CENPMQ9NSP4 180 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 URGCP-MRPS24S4R325 110 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 FREM3P0C091 2139 aa13.31□□□□□ -0.28
CLCN1-201ENST00000343257 URADA6NGE7 173 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SERINC4A6NH21 518 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 RHPN2P1A8MT19 583 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 RAB27BO00194 218 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 XKRYO14609 159 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 DRD3P35462 400 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SLC25A1P53007 311 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 DVL1P1P54792 670 aaPredicted RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 CLDN6P56747 220 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 BIKQ13323 160 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF260Q3ZCT1 412 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 LHX8Q68G74 356 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 UNQ6494/PRO21346Q6UXR6 183 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 EGLN1Q9GZT9 426 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 PTGES2Q9H7Z7 377 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 PILRAQ9UKJ1 303 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 HCRTR1O43613 425 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 HLA-GP17693 338 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SULT1A1P50225 295 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 EGR3Q06889 387 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SFTPA2Q8IWL1 248 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 METTL27Q8N6F8 245 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms