RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 EFNB3Q15768 340 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 KCNMB1Q16558 191 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
TSPO-201ENST00000329563 LINC01590Q5TEZ4 76 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 LAIR2Q6ISS4 152 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 FAM166AQ6J272 317 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 UGT2A3Q6UWM9 527 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 FOXL2NBQ6ZUU3 175 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 ZCCHC24Q8N2G6 241 aaKnown RBP12.67□□□□□ -0.38
TSPO-201ENST00000329563 RNFT2Q96EX2 444 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 WACQ9BTA9 647 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 MARCH7Q9H992 704 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 PSORS1C1Q9UIG5 152 aa12.67□□□□□ -0.38
TSPO-201ENST00000329563 A0A1W2PPL8 197 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 CCDC182A6NF36 153 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 FARS2O95363 451 aaKnown RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 IGHV4-31P0DP07 118 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 ZNF823P16415 610 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SRD5A1P18405 259 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SLC15A1P46059 708 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 CAPZA2P47755 286 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 KCTD21Q4G0X4 260 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 TEX30Q5JUR7 227 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 ZNF813Q6ZN06 617 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SHFQ7M4L6 423 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 DPPA2Q7Z7J5 298 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 STX19Q8N4C7 294 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SLC26A10Q8NG04 563 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 OR51L1Q8NGJ5 315 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 ZMYND19Q96E35 227 aaPredicted RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 CNN2Q99439 309 aaKnown RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 DOK1Q99704 481 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 FOXB1Q99853 325 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 VRK1Q99986 396 aaPredicted RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 YIPF3Q9GZM5 350 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 DUSP21Q9H596 190 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 ZNF442Q9H7R0 627 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 SIAEQ9HAT2 523 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 AMBNQ9NP70 447 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 EXOGQ9Y2C4 368 aaKnown RBP12.66□□□□□ -0.38
TSPO-201ENST00000329563 TMEM14AQ9Y6G1 99 aa12.66□□□□□ -0.38
TSPO-201ENST00000329563 PTGES3LE9PB15 166 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 XPNPEP2O43895 674 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 SBK2P0C263 348 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 OR2T7P0C7T2 308 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 OR8G3PP0DMU2 310 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 ZNF35P13682 527 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 MSR1P21757 451 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 EEF1B2P24534 225 aaKnown RBP12.65□□□□□ -0.38
TSPO-201ENST00000329563 DCKP27707 260 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 NR4A2P43354 598 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 PPOXP50336 477 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 ACTC1P68032 377 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 ACTA1P68133 377 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 CARTPTQ16568 116 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 SKA3Q8IX90 412 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 ZNF454Q8N9F8 522 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 OR2T27Q8NH04 317 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 GGHQ92820 318 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 MRPL48Q96GC5 212 aaKnown RBP12.65□□□□□ -0.38
TSPO-201ENST00000329563 FOXN4Q96NZ1 517 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 CDADC1Q9BWV3 514 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 RAB1BQ9H0U4 201 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.38
TSPO-201ENST00000329563 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 INPP5EQ9NRR6 644 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 FKBP14Q9NWM8 211 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 UGT2A1Q9Y4X1 527 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
TSPO-201ENST00000329563 SVEP1Q4LDE5 3571 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 IGKV1D-43A0A0B4J1Z2 117 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 LOC100289279A0A1B0GTE1 492 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 PHYHO14832 338 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 RAB36O95755 333 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 GAAP10253 952 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 CD79AP11912 226 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 NR4A1P22736 598 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 ENTPD1P49961 510 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 PCBD1P61457 104 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 SLC35A2P78381 396 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 SNTB2Q13425 540 aaKnown RBP12.64□□□□□ -0.39
TSPO-201ENST00000329563 SGCAQ16586 387 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 EGFL6Q8IUX8 553 aa12.64□□□□□ -0.39
TSPO-201ENST00000329563 ERI1Q8IV48 349 aaKnown RBP12.64□□□□□ -0.39
TSPO-201ENST00000329563 TIGD4Q8IY51 512 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms