RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 TP53I11O14683 189 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 NPIPB7O75200 414 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 RAB3DO95716 219 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 ZNF35P13682 527 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 GDF1P27539 372 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 RBMXP38159 391 aaKnown RBP9.46□□□□□ -0.89
CUL4A-201ENST00000326335 PHYHD1Q5SRE7 291 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 ALKAL2Q6UX46 152 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 BHLHE23Q8NDY6 225 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 TMEM104Q8NE00 496 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 C1orf198Q9H425 327 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 RELNP78509 3460 aa9.46□□□□□ -0.89
CUL4A-201ENST00000326335 FAM230AA0A1W2PPH8 454 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 GABARAPH6UMI1 98 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ACOT7O00154 380 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 SIGLEC5O15389 551 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ZNF780AO75290 641 aaPredicted RBP9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ZNF254O75437 659 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 CYB5AP00167 134 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ERP29P30040 261 aaKnown RBP9.46□□□□□ -0.9
CUL4A-201ENST00000326335 APOBEC1P41238 236 aaKnown RBP9.46□□□□□ -0.9
CUL4A-201ENST00000326335 OR3A4PP47883 348 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 SIGLEC14Q08ET2 396 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 IL10RAQ13651 578 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 DNM1P34Q6PK57 102 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ARMC10Q8N2F6 343 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 ZNF441Q8N8Z8 693 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 LILRB4Q8NHJ6 448 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 CLDN23Q96B33 292 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 SFXN2Q96NB2 322 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 RAB33BQ9H082 229 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 SHANK1Q9Y566 2161 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 NCOR2Q9Y618 2525 aa9.46□□□□□ -0.9
CUL4A-201ENST00000326335 E9PLN8 166 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 SLC33A1O00400 549 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 HSPB6O14558 160 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 LDOC1O95751 146 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 SSR4P51571 173 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CXADRP78310 365 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 LAMTOR1Q6IAA8 161 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 KCTD20Q7Z5Y7 419 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 COQ8AQ8NI60 647 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.45□□□□□ -0.92e-7■■■□□ 18.3
CUL4A-201ENST00000326335 B3GAT1Q9P2W7 334 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 NOP16Q9Y3C1 178 aaKnown RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 MAP1AP78559 2803 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 MEX3AA1L020 520 aaKnown RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 ANKRD34BA5PLL1 514 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 TNFRSF10AO00220 468 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 GABRR1P24046 479 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CSNK1A1P48729 337 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CX3CR1P49238 355 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 ZP1P60852 638 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 GABREP78334 506 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 EGR3Q06889 387 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 IGFBP7Q16270 282 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 DCAF12L2Q5VW00 463 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 RAB11FIP2Q7L804 512 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 NLRC3Q7RTR2 1065 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 OR2M3Q8NG83 312 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 OR1J2Q8NGS2 313 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 SNX18Q96RF0 628 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 MFRPQ9BY79 579 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 GHITMQ9H3K2 345 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 ZNF701Q9NV72 531 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 LOXL2Q9Y4K0 774 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 EEF1E1-BLOC1S5C9J1V9 151 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 CELA3AP09093 270 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 POU3F2P20265 443 aaPredicted RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 LCN1P31025 176 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 PADI1Q9ULC6 663 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 LHFPL6Q9Y693 200 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 R4GMQ9 66 aa9.45□□□□□ -0.9
CUL4A-201ENST00000326335 SPENQ96T58 3664 aaKnown RBP9.45□□□□□ -0.9
CUL4A-201ENST00000326335 GLSO94925 669 aaPredicted RBP9.44□□□□□ -0.9
CUL4A-201ENST00000326335 SPDEFO95238 335 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 TTRP02766 147 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 VSIG10L2P0DP72 767 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 SORDQ00796 357 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 TNK1Q13470 666 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 PCOLCEQ15113 449 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 STEAP1BQ6NZ63 245 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 GLIPR1L1Q6UWM5 242 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 UNQ9370/PRO34162Q6UXP9 181 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 BTN2A1Q7KYR7 527 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 TIPARPQ7Z3E1 657 aaKnown RBP9.44□□□□□ -0.9
CUL4A-201ENST00000326335 TRAPPC6BQ86SZ2 158 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 BPIFB2Q8N4F0 458 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 ABHD3Q8WU67 409 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 DYRK2Q92630 601 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 HGDQ93099 445 aa9.44□□□□□ -0.9
CUL4A-201ENST00000326335 THOC3Q96J01 351 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms