RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 EXTL1Q92935 676 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 OR2B2Q9GZK3 357 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
PDLIM5-201ENST00000317968 SH2D1BO14796 132 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 QDPRP09417 244 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 EDDM3BP56851 147 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SCAND1P57086 179 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 LSM6P62312 80 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 MSMO1Q15800 293 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SLC38A9Q8NBW4 561 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OR52N5Q8NH56 324 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 APH1BQ8WW43 257 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OR5M11Q96RB7 305 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 RHNO1Q9BSD3 238 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OR51E2Q9H255 320 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF286AQ9HBT8 521 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 TXNL4BQ9NX01 149 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 ETV7Q9Y603 341 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SMPD2O60906 423 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 GYPBP06028 91 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 GRPP07492 148 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 YES1P07947 543 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 UBBP0CG47 229 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 STOMP27105 288 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 NR4A2P43354 598 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 CDK5R1Q15078 307 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM69Q5SWH9 247 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OR2G6Q5TZ20 316 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 DOK3Q7L591 496 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 TMEM99Q8N816 258 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SIMC1Q8NDZ2 872 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SEMA6DQ8NFY4 1073 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 UPRTQ96BW1 309 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 RGCCQ9H4X1 137 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 GLTPQ9NZD2 209 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 A0A1W2PNV4 684 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 AQP8O94778 261 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 SCGB1D2O95969 90 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 IGFBP1P08833 259 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 GSTP1P09211 210 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 RAB13P51153 203 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 LSRQ86X29 649 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 LRRC28Q86X40 367 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 ZNF808Q8N4W9 903 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OTOSQ8NHW6 89 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 OR8B4Q96RC9 309 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 AASSQ9UDR5 926 aa7.65□□□□□ -1.18
PDLIM5-201ENST00000317968 KLF7O75840 302 aaPredicted RBP7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 TPPPO94811 219 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 IFNA5P01569 189 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 MAS1P04201 325 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 SERPINF1P36955 418 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF81P51508 661 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 RHOUQ7L0Q8 258 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 OR2M7Q8NG81 312 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 OR52H1Q8NGJ2 320 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 TRIM63Q969Q1 353 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 APOBEC3DQ96AK3 386 aaPredicted RBP7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 OPALINQ96PE5 141 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 NUDT16L1Q9BRJ7 211 aaKnown RBP7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC25A18Q9H1K4 315 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 MED28Q9H204 178 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 V9GY05 133 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 SPTBP11277 2137 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 IGHMP01871 453 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 DCTDP32321 178 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 MEP1BQ16820 701 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 CDONQ4KMG0 1287 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 XAF1Q6GPH4 301 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 THSD4Q6ZMP0 1018 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF511Q8NB15 262 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 INO80EQ8NBZ0 244 aaPredicted RBP7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 SYNPRQ8TBG9 265 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 GHSRQ92847 366 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 GMPPAQ96IJ6 420 aaPredicted RBP7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 C1QTNF6Q9BXI9 259 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 MED20Q9H944 212 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 TP53TG5Q9Y2B4 290 aa7.65□□□□□ -1.19
PDLIM5-201ENST00000317968 ASXL3Q9C0F0 2248 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 H3BMH7 237 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 MPIG6BO95866 241 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 LIMS3P0CW19 117 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 LIMS4P0CW20 117 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC2A2P11168 524 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 ETV5P41161 510 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 ETV1P50549 477 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF83P51522 516 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 RPS4XP62701 263 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 COL9A2Q14055 689 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 NPRL2Q8WTW4 380 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 EMG1Q92979 244 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 DPAGT1Q9H3H5 408 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 PLK3Q9H4B4 646 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 COA3Q9Y2R0 106 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 AMMECR1Q9Y4X0 333 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 UGT2A1Q9Y4X1 527 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 SMCO3A2RU48 225 aa7.64□□□□□ -1.19
PDLIM5-201ENST00000317968 C5orf49A4QMS7 147 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms