RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CTF1Q16619 201 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A2Q5DJT8 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 LSRQ86X29 649 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF2Q9BSG1 426 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SMCO4Q9NRQ5 59 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 XRCC3O43542 346 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 OR8U8P0C7N1 319 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 PSMB3P49720 205 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CLINT1Q14677 625 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 ELFN2Q5R3F8 820 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CCDC190Q86UF4 302 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 RBMXL3Q8N7X1 1067 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 EXD3Q8N9H8 876 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 NOXO1Q8NFA2 376 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SMIM4Q8WVI0 70 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 C3orf49Q96BT1 292 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 ISG20L2Q9H9L3 353 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 C12orf10Q9HB07 376 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SLCO1C1Q9NYB5 712 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CDK5RAP2Q96SN8 1893 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 HLA-HP01893 362 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GRPP07492 148 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 THBS4P35443 961 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 HIST2H3PS2Q5TEC6 136 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 REEP6Q96HR9 211 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 COX14Q96I36 57 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 IER2Q9BTL4 223 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 HEYLQ9NQ87 328 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GDF2Q9UK05 429 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 NUPL2O15504 423 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 APEHP13798 732 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 EDDM3BP56851 147 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 PPIAP62937 165 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 HYAL1Q12794 435 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CORO6Q6QEF8 472 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CISD2Q8N5K1 135 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GPBAR1Q8TDU6 330 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 C8orf44Q96CB5 159 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GNPNAT1Q96EK6 184 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 LIN37Q96GY3 246 aaPredicted RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 STRAPQ9Y3F4 350 aaKnown RBP11.58□□□□□ -0.56
PTCD1-201ENST00000292478 LGALS8O00214 317 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 EPHA2P29317 976 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SOX18P35713 384 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 DHODHQ02127 395 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 CLN3Q13286 438 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 HIST2H3AQ71DI3 136 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OR10R2Q8NGX6 335 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OR8B4Q96RC9 309 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 LANCL2Q9NS86 450 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 EXOGQ9Y2C4 368 aaKnown RBP11.57□□□□□ -0.56
PTCD1-201ENST00000292478 MDFIC2A0A1B0GVS7 189 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 HPNP05981 417 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 HLA-DOBP13765 273 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OR10A3P58181 314 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF793Q6ZN11 406 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 H2BFWTQ7Z2G1 175 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FAM185AQ8N0U4 392 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 TMEM229BQ8NBD8 167 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OTOSQ8NHW6 89 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FOXQ1Q9C009 403 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ERVMER34-1Q9H9K5 563 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 TSTD3H0UI37 97 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 APOA2P02652 100 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FABP1P07148 127 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PSMB6P28072 239 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 DBPQ10586 325 aaPredicted RBP11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FOXF1Q12946 379 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 MED29Q9NX70 200 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 TMEM235A6NFC5 223 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SLC17A2O00624 439 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ARPC3O15145 178 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 CXCL13O43927 109 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PIAS2O75928 621 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ALX3O95076 343 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SCAND1P57086 179 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 AVPI1Q5T686 147 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 HSD17B11Q8NBQ5 300 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OR13C5Q8NGS8 318 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 OR2V1Q8NHB1 315 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 GPX8Q8TED1 209 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 FBXL4Q9UKA2 621 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 CSAG2Q9Y5P2 127 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 KCNE3Q9Y6H6 103 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 THSD7AQ9UPZ6 1657 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
PTCD1-201ENST00000292478 RAD52P43351 418 aa11.57□□□□□ -0.56
PTCD1-201ENST00000292478 SUB1P53999 127 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms