RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF28P17035 718 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ALOX5APP20292 161 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SDHAP31040 664 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 CDKN2AP42771 156 aaKnown RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 MAGEB1P43366 347 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SLC6A9P48067 706 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 CENPAP49450 140 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 EFNB2P52799 333 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 GPR85P60893 370 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 UBE2MP61081 183 aaKnown RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 TLE3Q04726 772 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 NKAPLQ5M9Q1 402 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 FAM74A1Q5RGS3 127 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 LEG1Q6P5S2 330 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZAR1Q86SH2 424 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 JAZF1Q86VZ6 243 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 DTX1Q86Y01 620 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 C19orf47Q8N9M1 422 aaKnown RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 OR51D1Q8NGF3 324 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZPLD1Q8TCW7 415 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 RASD2Q96D21 266 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SMAD5Q99717 465 aaKnown RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 PRRT1Q99946 306 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF471Q9BX82 626 aaPredicted RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 FGF21Q9NSA1 209 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 PTPRQQ9UMZ3 2332 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 MEGF11A6BM72 1044 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 STMND1H3BQB6 276 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 GPR31O00270 319 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 KLK10O43240 276 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 FOXS1O43638 330 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 STK17BO94768 372 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 TIAF1O95411 115 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SLC35E2P0CK97 266 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 PNMTP11086 282 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 LYL1P12980 280 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 TPT1P13693 172 aaKnown RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ABOP16442 354 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 RAB6AP20340 208 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 KIR3DL2P43630 455 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ACY1Q03154 408 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 LRRC69Q6ZNQ3 347 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF676Q8N7Q3 588 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 OR5AP2Q8NGF4 316 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 RNF141Q8WVD5 230 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ASB17Q8WXJ9 295 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM106AQ96A25 262 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZBTB8AQ96BR9 441 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF501Q96CX3 271 aaPredicted RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 PIK3IP1Q96FE7 263 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF304Q9HCX3 659 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 PDE7BQ9NP56 450 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ERVK-19Q9WJR5 959 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM184BQ9Y519 407 aaPredicted RBP9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ZFHX4Q86UP3 3567 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 ITPR1Q14643 2758 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 FGF17O60258 216 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 IGFBP3P17936 291 aaPredicted RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 TBPP20226 339 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 RPL35P42766 123 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 SOX2P48431 317 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 SRSF6Q13247 344 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 EEF1A1P5Q5VTE0 462 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 AWAT2Q6E213 333 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 TIPARPQ7Z3E1 657 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 PPP1R3BQ86XI6 285 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 OR4N5Q8IXE1 308 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 PRSS35Q8N3Z0 413 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 OR1J2Q8NGS2 313 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 THAP6Q8TBB0 222 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 SFT2D1Q8WV19 159 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 C3orf49Q96BT1 292 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF75AQ96N20 296 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF587Q96SQ5 575 aaPredicted RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 NUDT16L1Q9BRJ7 211 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 PDCD10Q9BUL8 212 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 ULBP3Q9BZM4 244 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 FKRPQ9H9S5 495 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 FAM60AQ9NP50 221 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 MYEF2Q9P2K5 600 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 RARRES3Q9UL19 164 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 LAMA5O15230 3695 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 H0YC42 278 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 HCRTR1O43613 425 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 MAS1P04201 325 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 ITGA5P08648 1049 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 S1PR1P21453 382 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 GABRA4P48169 554 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 CYCSP99999 105 aaKnown RBP9.23□□□□□ -0.93
UPF3B-201ENST00000276201 PJVKQ0ZLH3 352 aa9.23□□□□□ -0.93
UPF3B-201ENST00000276201 ZNHIT3Q15649 155 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms