RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PLXNA2O75051 1894 aa12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 ACTL6AO96019 429 aa12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF32P17041 273 aa12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 KCNJ15Q99712 375 aa12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-201ENST00000265810 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CDX4O14627 284 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 YES1P07947 543 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF17P17021 662 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CRYBB2P43320 205 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 PSMA6P60900 246 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CDC20Q12834 499 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 BATF2Q8N1L9 274 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 KLF7O75840 302 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 UBL3O95164 117 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 HLA-HP01893 362 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 BLVRBP30043 206 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CDONQ4KMG0 1287 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 RNF128Q8TEB7 428 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 MUC6Q6W4X9 2439 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 DLL1O00548 723 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 IFNA21P01568 189 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 TFP02787 698 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 MT-ND4P03905 459 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CSF1P09603 554 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ELK1P19419 428 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 TNFSF4P23510 183 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 GPR176Q14439 515 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ANKRD16Q6P6B7 361 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 PRR18Q8N4B5 295 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 REEP6Q96HR9 211 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 C4orf45Q96LM5 186 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 BANF2Q9H503 90 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 FBXO9Q9UK97 447 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ADAM11O75078 769 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 RAB3CQ96E17 227 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 RNF170Q96K19 258 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 SEMA5BQ9P283 1151 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 MRM2Q9UI43 246 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 RBMX2Q9Y388 322 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 PMF1-BGLAPU3KQ54 211 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 OBSL1O75147 1896 aa12.88□□□□□ -0.35
PDLIM2-201ENST00000265810 IFITM5A6NNB3 132 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 AKR1C4P17516 323 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 GIFP27352 417 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 ZNF468Q5VIY5 522 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 PRSS45Q7RTY3 260 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 COPZ2Q9P299 210 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 ETV7Q9Y603 341 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 GABRB1P18505 474 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 ADGRE4PQ86SQ3 457 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 FANCMQ8IYD8 2048 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 A0A0X1KG70 313 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 B4DXG7 233 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 ATP6V1G1O75348 118 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 DIRAS3O95661 229 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 IGHA1P01876 353 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 EGR4Q05215 589 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 SLC25A35Q3KQZ1 300 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 SSX6Q7RTT6 188 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 RBM38Q9H0Z9 239 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-201ENST00000265810 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 BMP5P22003 454 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 RBMXP38159 391 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 PMPCAQ10713 525 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 CREB3L2Q70SY1 520 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 OR6S1Q8NH40 331 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 TOMM40LQ969M1 308 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 GPR160Q9UJ42 338 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 AIPO00170 330 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 GSTT2P0CG29 244 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 FAHP16930 419 aa12.86□□□□□ -0.35
PDLIM2-201ENST00000265810 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms