RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ANKRD20A5PA0PJZ0 165 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 C21orf140B9A014 251 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 RFC3P40938 356 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 CLDN15P56746 228 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 RAC3P60763 192 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 OR10K2Q6IF99 312 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 DNM1P46Q6ZS02 220 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 SCMH1Q96GD3 660 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 RNF170Q96K19 258 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
PRKAB1-201ENST00000229328 KIAA1549Q9HCM3 1950 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 C5orf63A6NC05 138 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 E9PLN8 166 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ACOT7O00154 380 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 CXCL13O43927 109 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 NEURL1O76050 574 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GDF1P27539 372 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GNALP38405 381 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 CARD18P57730 90 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 IFITM2Q01629 132 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ENDOGQ14249 297 aaKnown RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 LRRC18Q8N456 261 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 OR4D6Q8NGJ1 314 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ADAMTS17Q8TE56 1095 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 CAPSLQ8WWF8 208 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 RBM24Q9BX46 236 aaKnown RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ATG5Q9H1Y0 275 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 TP63Q9H3D4 680 aaPredicted RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GHITMQ9H3K2 345 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 NCOA6Q14686 2063 aaPredicted RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GJE1A6NN92 205 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 CNR1P21554 472 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 GALK2Q01415 458 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 EIF3IQ13347 325 aaKnown RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ZNF813Q6ZN06 617 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 NAA40Q86UY6 237 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 KCNE4Q8WWG9 221 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 AKAP1Q92667 903 aaKnown RBP eCLIP12.73□□□□□ -0.375e-9■■■■■ 39.7
PRKAB1-201ENST00000229328 BEX1Q9HBH7 125 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 ZFP64Q9NPA5 681 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 FLVCR2Q9UPI3 526 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 TMA7Q9Y2S6 64 aaKnown RBP12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 BOLA1Q9Y3E2 137 aa12.73□□□□□ -0.37
PRKAB1-201ENST00000229328 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 PCNX2A6NKB5 2137 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 DHHO43323 396 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 ECDO95905 644 aaPredicted RBP12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 DHFRP00374 187 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 MSR1P21757 451 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 CX3CR1P49238 355 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 SF3B4Q15427 424 aaKnown RBP eCLIP12.72□□□□□ -0.378e-7■■■■■ 30.8
PRKAB1-201ENST00000229328 DCAF10Q5QP82 559 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 BTN2A1Q7KYR7 527 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 RHOUQ7L0Q8 258 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 RNF144BQ7Z419 303 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 ADGRG7Q96K78 797 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 NELFAQ9H3P2 528 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 MOV10Q9HCE1 1003 aaKnown RBP12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 OR5H15A6NDH6 313 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 MEIS3P1A6NDR6 274 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 ALDOBP05062 364 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 FCER2P06734 321 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 ABOP16442 354 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 LSM6P62312 80 aaKnown RBP12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 FAM209AQ5JX71 171 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 C1orf100Q5SVJ3 147 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 SUMF1Q8NBK3 374 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 BEST4Q8NFU0 473 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 CNTD2Q9H8S5 307 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 DIABLOQ9NR28 239 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 PLA2G3Q9NZ20 509 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 COPZ2Q9P299 210 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 SLC5A6Q9Y289 635 aa12.72□□□□□ -0.37
PRKAB1-201ENST00000229328 A0A1B0GVI7 797 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 ANKRD34BA5PLL1 514 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 SMLR1H3BR10 107 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 ITGA3P26006 1051 aa12.71□□□□□ -0.37
PRKAB1-201ENST00000229328 FCN2Q15485 313 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms