RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gdpd3Q99LY2 330 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Commd4Q9CQ02 199 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Prr23a3Q9CWP9 254 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Jam3Q9D8B7 310 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Sorcs1Q9JLC4 1167 aa20.23■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ighv1-78A0A0G2JGN3 117 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Trabd2bB1ATG9 517 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm9008E9PVG0 424 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 TpbpaP13438 124 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Cass4Q08EC4 804 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tmem171Q4KL18 322 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Lrrn1Q61809 716 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Hist2h2abQ64522 130 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1135Q7TR42 310 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Xkr8Q8C0T0 401 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 FevQ8QZW2 237 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1487Q8VFQ6 315 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Arl4dQ99PE9 201 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Copz2Q9JHH9 205 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Fbxo15Q9QZN0 433 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 CcniQ9Z2V9 377 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Nup214Q80U93 2085 aa20.22■□□□□ 0.83
Scn1b-201ENSMUST00000098548 4930522L14RikE9QAG4 666 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm8871F7AXK2 190 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn1r103K7N6X7 305 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn1r122K7N726 305 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn1r151L7N288 305 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ccl3P10855 92 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 C1qbP14106 253 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 PpibP24369 216 aaKnown RBP20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Guca2aP33680 116 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Atf4Q06507 349 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Fut4Q11127 433 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Bend6Q6PFX2 281 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr301Q7TS04 311 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tmem127Q8BGP5 238 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dapk2Q8VDF3 370 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr829Q8VGX1 321 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Flvcr2Q91X85 551 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 TpbpbQ9CQC0 121 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Pop4Q9CR08 221 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Q9CR55 154 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Utp23Q9CX11 249 aaKnown RBP20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Dazap2Q9DCP9 168 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Prok2Q9QXU7 128 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Plekhb1Q9QYE9 243 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 MokQ9WVS4 420 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Phf1Q9Z1B8 559 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gm266A6H634 200 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Vmn2r36K7N741 852 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 GzmmO08643 264 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Pgm2Q7TSV4 620 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Mogat2Q80W94 334 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Steap2Q8BWB6 489 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 CcnqQ8QZR8 250 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 B4galt7Q8R087 327 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Olfr1417Q8VGJ6 315 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Plpp7Q91WB2 271 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Gpx6Q91WR8 221 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 WacQ924H7 646 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Rpl22l1Q9D7S7 122 aaKnown RBP20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tysnd1Q9DBA6 568 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tbl2Q9R099 442 aaKnown RBP20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Ch25hQ9Z0F5 298 aa20.21■□□□□ 0.83
Scn1b-201ENSMUST00000098548 Tanc2A2A690 1994 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 PtprbB2RU80 1998 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 NbasE9Q411 2356 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Sdccag3A2AIW0 432 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Mllt6B1AR10 1109 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Olfr370E9Q848 314 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Gm8050L7N2E3 205 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Cops3O88543 423 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 NgfP01139 241 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 TtkP35761 856 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Serpine2Q07235 397 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Slc2a6Q3UDF0 497 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 C1rlQ3UZ09 482 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Bcap31Q61335 245 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Klk8Q61955 260 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Ppp1r14bQ62084 147 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Nptx1Q62443 432 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Cpeb3Q7TN99 716 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Olfr598Q7TRR2 319 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Olfr429Q7TRW1 312 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Znf8Q8BGV5 572 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Prss27Q8BJR6 328 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Pla2g3Q8BZT7 504 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 PiguQ8K358 434 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Q91V76 315 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 NwcQ9CQI4 244 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Arl5bQ9D4P0 179 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Ppp1r35Q9D8C8 260 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Olfr937Q9EQB4 311 aa20.2■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Trbc1A0A0A6YWV4 173 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Skint4A7TZF3 474 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Olfr547E9PXN3 311 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Psg20E9Q9B4 475 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Maml2F6U238 1170 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 P01852 173 aa20.19■□□□□ 0.82
Scn1b-201ENSMUST00000098548 Cox4i1P19783 169 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms