RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 KLHL24Q6TFL4 600 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 CEACAM19Q7Z692 300 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 CATSPERDQ86XM0 798 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 UBE2J2Q8N2K1 259 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 CISD2Q8N5K1 135 aaKnown RBP8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 C9orf106Q8NAJ2 232 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 OR5AK2Q8NH90 309 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 FBXO17Q96EF6 278 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 C4orf45Q96LM5 186 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 SH3GL3Q99963 347 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 KCNN2Q9H2S1 579 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 CXorf56Q9H5V9 222 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 PNRC2Q9NPJ4 139 aaKnown RBP8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 GLRX2Q9NS18 164 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 PRSS50Q9UI38 385 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 SLC22A13Q9Y226 551 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 R4GMQ9 66 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 PMF1-BGLAPU3KQ54 211 aa8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 SPENQ96T58 3664 aaKnown RBP8.72□□□□□ -1.01
SOX2-OT-244ENST00000627738 TMEM269A0A1B0GVZ9 245 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 A0A1W2PPK0 400 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SHISA3A0PJX4 238 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 LOC110117498-PIK3R3F6TDL0 507 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 RPL36A-HNRNPH2H7BZ11 118 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 TPOP07202 933 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 CST2P09228 141 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 PAX7P23759 505 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 HSD11B1P28845 292 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SDC2P34741 201 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 CCR9P51686 369 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 FOXG1P55316 489 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SH3BGRP55822 239 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 HIST1H3AP68431 136 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ARF1P84077 181 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 FAPQ12884 760 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 STK11Q15831 433 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ODF4Q2M2E3 257 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF829Q3KNS6 432 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 CCDC92Q53HC0 331 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 YIF1BQ5BJH7 314 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 FAM27D1Q5T7N8 215 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 HIST2H3PS2Q5TEC6 136 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 C9orf135Q5VTT2 229 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF544Q6NX49 715 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 PAMR1Q6UXH9 720 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF813Q6ZN06 617 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 HIST2H3AQ71DI3 136 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 RDH10Q8IZV5 341 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 GCNT2Q8N0V5 402 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SLC22A24Q8N4F4 322 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF676Q8N7Q3 588 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 GJC3Q8NFK1 279 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 IL17RDQ8NFM7 739 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 RGP1Q92546 391 aaPredicted RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 OR14A2Q96R54 314 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SLIRPQ9GZT3 109 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 COMMD4Q9H0A8 199 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 PPIL3Q9H2H8 161 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 G6PC2Q9NQR9 355 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SNTG1Q9NSN8 517 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 CCDC59Q9P031 241 aaKnown RBP8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 TUBD1Q9UJT1 453 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 OR52A1Q9UKL2 312 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 EMC9Q9Y3B6 208 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 DMXL2Q8TDJ6 3036 aa8.71□□□□□ -1.02
SOX2-OT-244ENST00000627738 SMIM30A4D0T7 59 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 TMEM212A6NML5 194 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 H3BSH0 61 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 CASKO14936 926 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 GATBO75879 557 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 CLPXO76031 633 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 FARS2O95363 451 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 IL1AP01583 271 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 PATE4P0C8F1 98 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF32P17041 273 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 CALRP27797 417 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 DCTDP32321 178 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 SOX6P35712 828 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 MAGEB1P43366 347 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 OR3A2P47893 321 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 PRKXP51817 358 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 TDGF1P3P51864 188 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 GRB2P62993 217 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 SF3B4Q15427 424 aaKnown RBP eCLIP8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 GUSBP1Q15486 140 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZNF404Q494X3 552 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 ZMAT1Q5H9K5 638 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 ELFN2Q5R3F8 820 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 NSUN5P2Q63ZY6 315 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 UNQ9370/PRO34162Q6UXP9 181 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 RHOUQ7L0Q8 258 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 SLC16A14Q7RTX9 510 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 SKA3Q8IX90 412 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 TEX19Q8NA77 164 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 MCFD2Q8NI22 146 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 FGFBP3Q8TAT2 258 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 FAM57AQ8TBR7 257 aa8.7□□□□□ -1.02
SOX2-OT-244ENST00000627738 TBC1D15Q8TC07 691 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms