RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TFF3Q07654 80 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 FAM205BPQ63HN1 556 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 ZNF100Q8IYN0 542 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 TMEM123Q8N131 208 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 PARP16Q8N5Y8 322 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 ACBD4Q8NC06 268 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 AP3S1Q92572 193 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 GHSRQ92847 366 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 CEP19Q96LK0 163 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 OR2M2Q96R28 347 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 INTS14Q96SY0 518 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 TMEM14AQ9Y6G1 99 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 CACNA1DQ01668 2161 aa16.8■□□□□ 0.28
CNOT9-209ENST00000627282 SHISA3A0PJX4 238 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 SERPINA3P01011 423 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 TACSTD2P09758 323 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 TNFSF8P32971 234 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 GDI2P50395 445 aaKnown RBP16.79■□□□□ 0.28
CNOT9-209ENST00000627282 ASCL1P50553 236 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 BIDP55957 195 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 IFITM3Q01628 133 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 RGS21Q2M5E4 152 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 SPANXN2Q5MJ10 180 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 TSPO2Q5TGU0 170 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 HAVCR2Q8TDQ0 301 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 CHPT1Q8WUD6 406 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 ACOXLQ9NUZ1 547 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 CMAHPQ9Y471 501 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 DCHS2Q6V1P9 2916 aa16.79■□□□□ 0.28
CNOT9-209ENST00000627282 PRR32B1ATL7 298 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 LOC110117498-PIK3R3F6TDL0 507 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 PHYHO14832 338 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 SLC16A7O60669 478 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 MRPL28Q13084 256 aaKnown RBP16.78■□□□□ 0.28
CNOT9-209ENST00000627282 FBXL19-AS1Q494R0 122 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 PAMR1Q6UXH9 720 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 CEACAM19Q7Z692 300 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 OR6N2Q8NGY6 317 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 OR6X1Q8NH79 312 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 SPOCK3Q9BQ16 436 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 SLC30A2Q9BRI3 323 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 SLCO5A1Q9H2Y9 848 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 SLC7A10Q9NS82 523 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 LAMP5Q9UJQ1 280 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 KLHDC2Q9Y2U9 406 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 TRBV2A0A0J9YWF9 115 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 GPRIN2O60269 458 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 UPK1BO75841 260 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 PRF1P14222 555 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 ALOX5APP20292 161 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 CRABP1P29762 137 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 EGR3Q06889 387 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 CAMK2DQ13557 499 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 ACSM3Q53FZ2 586 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 GABRG1Q8N1C3 465 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 NPDC1Q9NQX5 325 aaPredicted RBP16.78■□□□□ 0.28
CNOT9-209ENST00000627282 MALT1Q9UDY8 824 aa16.78■□□□□ 0.28
CNOT9-209ENST00000627282 MRM2Q9UI43 246 aaKnown RBP16.78■□□□□ 0.28
CNOT9-209ENST00000627282 FBN2P35556 2912 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 RGS5O15539 181 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 UPK3AO75631 287 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 CTLA4P16410 223 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 IGFBP2P18065 325 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 CFL1P23528 166 aaKnown RBP16.77■□□□□ 0.27
CNOT9-209ENST00000627282 PSMB10P40306 273 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 CAV3P56539 151 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 ZNF181Q2M3W8 571 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 CARD17Q5XLA6 110 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 FBXW9Q5XUX1 488 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 DNM1P34Q6PK57 102 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 FAM220AQ7Z4H9 259 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 CENPSQ8N2Z9 138 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 RNF166Q96A37 237 aaPredicted RBP16.77■□□□□ 0.27
CNOT9-209ENST00000627282 KCNK17Q96T54 332 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 RBM24Q9BX46 236 aaKnown RBP16.77■□□□□ 0.27
CNOT9-209ENST00000627282 PPIL3Q9H2H8 161 aaKnown RBP16.77■□□□□ 0.27
CNOT9-209ENST00000627282 MIXL1Q9H2W2 232 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 FOXD3Q9UJU5 478 aaPredicted RBP16.77■□□□□ 0.27
CNOT9-209ENST00000627282 UGT2A1Q9Y4X1 527 aa16.77■□□□□ 0.27
CNOT9-209ENST00000627282 PRR14LQ5THK1 2151 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 SMIM30A4D0T7 59 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 ZNF726A6NNF4 738 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 CENPBD1B2RD01 187 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 SLC43A1O75387 559 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 CNOT4O95628 575 aaKnown RBP16.76■□□□□ 0.27
CNOT9-209ENST00000627282 ABHD16AO95870 558 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 GPANK1O95872 356 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 CALRP27797 417 aaKnown RBP16.76■□□□□ 0.27
CNOT9-209ENST00000627282 FOXG1P55316 489 aaPredicted RBP16.76■□□□□ 0.27
CNOT9-209ENST00000627282 PHYHD1Q5SRE7 291 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 UNQ9370/PRO34162Q6UXP9 181 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 DCDC5Q6ZRR9 648 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 Q6ZT83 130 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 BEND4Q6ZU67 534 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 LINGO2Q7L985 606 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 DPY19L4Q7Z388 723 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 TPRA1Q86W33 373 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 SNX29P2Q8IUI4 249 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 LAX1Q8IWV1 398 aa16.76■□□□□ 0.27
CNOT9-209ENST00000627282 C20orf196Q8IYI0 205 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms