RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 COL8A2P25067 703 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 GPR6P46095 362 aaPredicted RBP19.04■□□□□ 0.64
SF1-220ENST00000626028 PPP1R8Q12972 351 aaKnown RBP19.04■□□□□ 0.64
SF1-220ENST00000626028 ALKBH6Q3KRA9 238 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 SLC18B1Q6NT16 456 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 PTP4A1Q93096 173 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 HAVCR1Q96D42 359 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 MSI2Q96DH6 328 aaKnown RBP19.04■□□□□ 0.64
SF1-220ENST00000626028 FEVQ99581 238 aa19.04■□□□□ 0.64
SF1-220ENST00000626028 RBM4Q9BWF3 364 aaKnown RBP19.04■□□□□ 0.64
SF1-220ENST00000626028 ZNF275Q9NSD4 429 aaPredicted RBP19.04■□□□□ 0.64
SF1-220ENST00000626028 IGHV1-69-2A0A0G2JMI3 117 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 LYNX1G3V0Z9 82 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 IFNGP01579 166 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 IGHV1-46P01743 117 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 LYNX1P0DP58 116 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 ZNF823P16415 610 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 GGT2P36268 569 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 SLC25A1P53007 311 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 PSG7Q13046 419 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 MEP1BQ16820 701 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 KRTAP27-1Q3LI81 207 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 CHRFAM7AQ494W8 412 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 FBXW12Q6X9E4 464 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 SPATA24Q86W54 205 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 SLC37A3Q8NCC5 494 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 PROKR2Q8NFJ6 384 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 TEX47Q8TBZ9 253 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 YIPF5Q969M3 257 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 ELMOD3Q96FG2 381 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 KCNS2Q9ULS6 477 aa19.03■□□□□ 0.64
SF1-220ENST00000626028 LOC100289279A0A1B0GTE1 492 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 GSC2O15499 205 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 TPD52L2O43399 206 aaKnown RBP19.02■□□□□ 0.64
SF1-220ENST00000626028 TIMM8AO60220 97 aaPredicted RBP19.02■□□□□ 0.64
SF1-220ENST00000626028 LMX1BO60663 402 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 GPANK1O95872 356 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 HFEQ30201 348 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 TMEM255AQ5JRV8 349 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 COLCA1Q6ZS62 124 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 ATF6BQ99941 703 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 NMNAT2Q9BZQ4 307 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 CMC2Q9NRP2 79 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 DNAJB9Q9UBS3 223 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 PURGQ9UJV8 347 aaKnown RBP19.02■□□□□ 0.64
SF1-220ENST00000626028 STARD10Q9Y365 291 aa19.02■□□□□ 0.64
SF1-220ENST00000626028 RIIAD1A6NNX1 92 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 ZNF16P17020 682 aaPredicted RBP19.01■□□□□ 0.63
SF1-220ENST00000626028 ZNF3P17036 446 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 TNFSF4P23510 183 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 SLC3A1Q07837 685 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 CDK5R2Q13319 367 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 PCK2Q16822 640 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 CORO6Q6QEF8 472 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 CFAP77Q6ZQR2 320 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 CYB561A3Q8NBI2 242 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 DNAJC9Q8WXX5 260 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 SLC7A6Q92536 515 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 NRBF2Q96F24 287 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 PITX2Q99697 317 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 NIPSNAP1Q9BPW8 284 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 FN3KQ9H479 309 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 ZNF556Q9HAH1 456 aa19.01■□□□□ 0.63
SF1-220ENST00000626028 MRPL22Q9NWU5 206 aaKnown RBP19.01■□□□□ 0.63
SF1-220ENST00000626028 LRP5LA4QPB2 252 aa19■□□□□ 0.63
SF1-220ENST00000626028 ZSCAN5BA6NJL1 495 aa19■□□□□ 0.63
SF1-220ENST00000626028 PPIHO43447 177 aaKnown RBP19■□□□□ 0.63
SF1-220ENST00000626028 FKBP6O75344 327 aa19■□□□□ 0.63
SF1-220ENST00000626028 E2F6O75461 281 aa19■□□□□ 0.63
SF1-220ENST00000626028 SOX14O95416 240 aa19■□□□□ 0.63
SF1-220ENST00000626028 ANXA8P13928 327 aa19■□□□□ 0.63
SF1-220ENST00000626028 FMO3P31513 532 aa19■□□□□ 0.63
SF1-220ENST00000626028 GRK5P34947 590 aa19■□□□□ 0.63
SF1-220ENST00000626028 CDH15P55291 814 aa19■□□□□ 0.63
SF1-220ENST00000626028 CBX1P83916 185 aa19■□□□□ 0.63
SF1-220ENST00000626028 TEX30Q5JUR7 227 aa19■□□□□ 0.63
SF1-220ENST00000626028 USP51Q70EK9 711 aa19■□□□□ 0.63
SF1-220ENST00000626028 LINC01356Q8N9X3 169 aa19■□□□□ 0.63
SF1-220ENST00000626028 OR4Q3Q8NH05 313 aa19■□□□□ 0.63
SF1-220ENST00000626028 CMBLQ96DG6 245 aa19■□□□□ 0.63
SF1-220ENST00000626028 C1QTNF5Q9BXJ0 243 aa19■□□□□ 0.63
SF1-220ENST00000626028 CADM1Q9BY67 442 aaKnown RBP19■□□□□ 0.63
SF1-220ENST00000626028 DDX28Q9NUL7 540 aaKnown RBP19■□□□□ 0.63
SF1-220ENST00000626028 ARMC1Q9NVT9 282 aa19■□□□□ 0.63
SF1-220ENST00000626028 PDP1Q9P0J1 537 aaPredicted RBP19■□□□□ 0.63
SF1-220ENST00000626028 CLDN25C9JDP6 229 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 SURF4O15260 269 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 SPRY3O43610 288 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 TGFAP01135 160 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 IFNA2P01563 188 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 DBHP09172 617 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 FAM157CP0CG43 387 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 PCMT1P22061 227 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 CRMP1Q14194 572 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 TRIP10Q15642 601 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 TSTQ16762 297 aaKnown RBP18.99■□□□□ 0.63
SF1-220ENST00000626028 RSPO1Q2MKA7 263 aaPredicted RBP18.99■□□□□ 0.63
SF1-220ENST00000626028 OTPQ5XKR4 325 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 SLC27A4Q6P1M0 643 aa18.99■□□□□ 0.63
SF1-220ENST00000626028 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms