RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 COPS4Q9BT78 406 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 C9orf16Q9BUW7 83 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 OSBPL10Q9BXB5 764 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 GABARAPL1Q9H0R8 117 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 RAB1BQ9H0U4 201 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 SLC25A19Q9HC21 320 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 CENPMQ9NSP4 180 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 FBXO9Q9UK97 447 aaPredicted RBP6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 GRIP1Q9Y3R0 1128 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 COMMD3-BMI1R4GMX3 469 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 DSCAMO60469 2012 aa6.23□□□□□ -1.41
NPLOC4-221ENST00000625705 HEATR1Q9H583 2144 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 PLSCR5A0PG75 271 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 F5H5K5 113 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 H3BNX3 289 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 PRODHO43272 600 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 TIMM8AO60220 97 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 SSX4O60224 188 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 GLCEO94923 617 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 TFP02787 698 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 TP53P04637 393 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 SCG5P05408 212 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 COX5BP10606 129 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 HSD11B1P28845 292 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 PCSK6P29122 969 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 NAA10P41227 235 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 RPS27P42677 84 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 UCP2P55851 309 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CDC42P60953 191 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CDK5Q00535 292 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ECH1Q13011 328 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 APOFQ13790 326 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 EIF2B1Q14232 305 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 RCN1Q15293 331 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 KCNMB1Q16558 191 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 MOGQ16653 247 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ALKBH6Q3KRA9 238 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ZNF718Q3SXZ3 478 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ACSM5Q6NUN0 579 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CLEC2AQ6UVW9 174 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CFAP77Q6ZQR2 320 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 DCXRQ7Z4W1 244 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CPOQ8IVL8 374 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 LRRC75A-AS1Q8N1F1 130 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 PAQR4Q8N4S7 273 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 CBR4Q8N4T8 237 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 OR5L1Q8NGL2 311 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 FAM81AQ8TBF8 368 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 SPTSSAQ969W0 71 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 MRPL24Q96A35 216 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ZMYND19Q96E35 227 aaPredicted RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 POM121L2Q96KW2 1035 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 Q96MF0 132 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 COG8Q96MW5 612 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 ZNF75AQ96N20 296 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 IL4I1Q96RQ9 567 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 TPK1Q9H3S4 243 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 HINT3Q9NQE9 182 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 N6AMT1Q9Y5N5 214 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 LHFPL6Q9Y693 200 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 FLNCQ14315 2725 aa6.22□□□□□ -1.41
NPLOC4-221ENST00000625705 HECTD1Q9ULT8 2610 aa6.21□□□□□ -1.41
NPLOC4-221ENST00000625705 LOC100509620A0A075B734 347 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ZNF878C9JN71 531 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 H7C417 338 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 M0R129 80 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ZNF593O00488 134 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SYNGR3O43761 229 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 TLX2O43763 284 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 LCATP04180 440 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ADRA2AP08913 450 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 MRPL3P09001 348 aaKnown RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ATP6V1E1P36543 226 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ALDH3B1P43353 468 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SLC15A1P46059 708 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 RGS6P49758 472 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 PPOXP50336 477 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ALDH3A2P51648 485 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 TPTEP56180 551 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ERVS71-1P61550 626 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 MALLQ13021 153 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 MAD2L1BPQ15013 274 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 TRIP10Q15642 601 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 EFNB3Q15768 340 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 LRRC36Q1X8D7 754 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 CLEC12BQ2HXU8 276 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ZIK1Q3SY52 487 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 CCDC92Q53HC0 331 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ZMAT1Q5H9K5 638 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SLC35D3Q5M8T2 416 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SLX4IPQ5VYV7 408 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SLC18B1Q6NT16 456 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 ZBTB49Q6ZSB9 765 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 RFPL4BQ6ZWI9 263 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 SHFQ7M4L6 423 aa6.21□□□□□ -1.42
NPLOC4-221ENST00000625705 MRPL21Q7Z2W9 205 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms