RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 CLVS2Q5SYC1 327 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 MRPL21Q7Z2W9 205 aaKnown RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 PBOV1Q9GZY1 135 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 GMDSO60547 372 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 EXOSC6Q5RKV6 272 aaKnown RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 FHL5Q5TD97 284 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 TMEM185AQ8NFB2 350 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 MRGPRX4Q96LA9 322 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 GNRHR2Q96P88 292 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 PIGQQ9BRB3 760 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 FOXJ3Q9UPW0 622 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 ANKUB1A6NFN9 424 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 SLC17A2O00624 439 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 OR7C1O76099 320 aaPredicted RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 DDAH2O95865 285 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF585AQ6P3V2 769 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 SULF2Q8IWU5 870 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 OR51A4Q8NGJ6 313 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 SLCO5A1Q9H2Y9 848 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 GDF2Q9UK05 429 aaPredicted RBP11.93□□□□□ -0.5
SIRPA-204ENST00000622179 PIGLQ9Y2B2 252 aa11.93□□□□□ -0.5
SIRPA-204ENST00000622179 AGPAT2O15120 278 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ICAM2P13598 275 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 GNB3P16520 340 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ENPP1P22413 925 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 MEX3BQ6ZN04 569 aaKnown RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 FAM71CQ8NEG0 241 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF680Q8NEM1 530 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 OR4S1Q8NGB4 309 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 PPA2Q9H2U2 334 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 COL4A6Q14031 1691 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 A6NCN8 305 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 TRIM64BA6NI03 449 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 GUSBP08236 651 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 NANOS3P60323 173 aaKnown RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 CEBPEQ15744 281 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 C9orf40Q8IXQ3 194 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF845Q96IR2 970 aaPredicted RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 CENPFP49454 3210 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 DCTN6O00399 190 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 DIRAS3O95661 229 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 PMS2P2O95744 297 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 PI3P19957 117 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 RAB2AP61019 212 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 SEC61A1P61619 476 aaKnown RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 EXT1Q16394 746 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 ANKRD37Q7Z713 158 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 SHISA5Q8N114 240 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 TTC9Q92623 222 aa11.92□□□□□ -0.5
SIRPA-204ENST00000622179 CMSS1Q9BQ75 279 aaKnown RBP11.92□□□□□ -0.5
SIRPA-204ENST00000622179 THBS2P35442 1172 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF616Q08AN1 781 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MGAT2Q10469 447 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 GNMTQ14749 295 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ESCO2Q56NI9 601 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 UNQ6126/PRO20091Q6UXV3 157 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 CTHRC1Q96CG8 243 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 CALHM2Q9HA72 323 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 EXOSC3Q9NQT5 275 aaKnown RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 GLTPQ9NZD2 209 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SLC23A1Q9UHI7 598 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MCTS1Q9ULC4 181 aaKnown RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SLCO1B1Q9Y6L6 691 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SVILO95425 2214 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 A6NLC8 198 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 C17orf51A8MQB3 221 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SLC33A1O00400 549 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 PLPP3O14495 311 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 PPP3CBP16298 524 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 RFC3P40938 356 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 TMPPEQ6ZT21 453 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 PGAP1Q75T13 922 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 RNF128Q8TEB7 428 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 M0R036 132 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ABOP16442 354 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MSR1P21757 451 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 C17orf107Q6ZR85 190 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MAML2Q8IZL2 1156 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 PAPOLGQ9BWT3 736 aaKnown RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 GSX2Q9BZM3 304 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 NTMQ9P121 344 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 MYOTQ9UBF9 498 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 WNT16Q9UBV4 365 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 TRAV8-7A0A075B6U6 113 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 A0A1B0GUH1 482 aa11.91□□□□□ -0.5
SIRPA-204ENST00000622179 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 GLSO94925 669 aaPredicted RBP11.91□□□□□ -0.5
SIRPA-204ENST00000622179 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms