RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, human

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT1-211	ENST00000618902	KLHL36	Q8N4N3	616 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	C10orf53	Q8N6V4	93 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	TCEANC	Q8N8B7	351 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR2T33	Q8NG76	320 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR9Q2	Q8NGE9	314 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR52I1	Q8NGK6	324 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR5J2	Q8NH18	312 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	TMEM45B	Q96B21	275 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	ZNF837	Q96EG3	531 aa	Predicted RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	SGTB	Q96EQ0	304 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	FAM46A	Q96IP4	442 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	LRR1	Q96L50	414 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	ZNF582	Q96NG8	517 aa	Predicted RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OXGR1	Q96P68	337 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR5M11	Q96RB7	305 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	TNFRSF13C	Q96RJ3	184 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	SRR	Q9GZT4	340 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	ESRP2	Q9H6T0	727 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	NIPAL2	Q9H841	368 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	FKRP	Q9H9S5	495 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	EXOSC4	Q9NPD3	245 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	INIP	Q9NRY2	104 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	SLC7A10	Q9NS82	523 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	RBFOX1	Q9NWB1	397 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	TXNL4B	Q9NX01	149 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	MED29	Q9NX70	200 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	ST6GALNAC2	Q9UJ37	374 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	FBXL3	Q9UKT7	428 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	SF3B6	Q9Y3B4	125 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	SVEP1	Q4LDE5	3571 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	PRRC2A	P48634	2157 aa	Known RBP	4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	USF3	Q68DE3	2245 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	CSPG4	Q6UVK1	2322 aa		4.61	□□□□□ -1.67
SHMT1-211	ENST00000618902	ATR	Q13535	2644 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	MED13L	Q71F56	2210 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	MEIOC	A2RUB1	952 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	SLC22A31	A6NKX4	558 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	C11orf98	E9PRG8	122 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IMPA2	O14732	288 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IDH3B	O43837	385 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	PEX14	O75381	377 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	MRPL33	O75394	65 aa	Known RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	UPK3A	O75631	287 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	SERPINI2	O75830	405 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CDRT1	O95170	752 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	DHFR	P00374	187 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	MT-ATP6	P00846	226 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IGHA1	P01876	353 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	HRG	P04196	525 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	TP53	P04637	393 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ITGA5	P08648	1049 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	NR2C1	P13056	603 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IL7	P13232	177 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IFNGR1	P15260	489 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	COX5A	P20674	150 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	PAICS	P22234	425 aa	Known RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IGHV1-2	P23083	117 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	IL32	P24001	234 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	LOX	P28300	417 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	GRK5	P34947	590 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ATP6V1E1	P36543	226 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	NR4A2	P43354	598 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	INPP1	P49441	399 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CLDN17	P56750	224 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ACTC1	P68032	377 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ACTA1	P68133	377 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	PUDP	Q08623	228 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CDK10	Q15131	360 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	NRN1L	Q496H8	165 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	AADACL4	Q5VUY2	407 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	FBXW9	Q5XUX1	488 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	TRIQK	Q629K1	86 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	TMEM53	Q6P2H8	277 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	FAM131A	Q6UXB0	335 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	SEZ6L2	Q6UXD5	910 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ZNF767P	Q75MW2	155 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	KCTD20	Q7Z5Y7	419 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	GPAT4	Q86UL3	456 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	LRRC28	Q86X40	367 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CXorf67	Q86X51	503 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CDC20B	Q86Y33	519 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ACBD7	Q8N6N7	88 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ASCC1	Q8N9N2	400 aa	Known RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR52L1	Q8NGH7	329 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR8D4	Q8NGM9	314 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR51A7	Q8NH64	312 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	LINC01560	Q8TB33	94 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	ENKUR	Q8TC29	256 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	HTRA1	Q92743	480 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	THRSP	Q92748	146 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	KISS1R	Q969F8	398 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	CREB3L1	Q96BA8	519 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	APH1A	Q96BI3	265 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	BPIFA2	Q96DR5	249 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	RNFT2	Q96EX2	444 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	HYLS1	Q96M11	299 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	OR2M2	Q96R28	347 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	SDHC	Q99643	169 aa	Predicted RBP	4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	KCNJ15	Q99712	375 aa		4.6	□□□□□ -1.67
SHMT1-211	ENST00000618902	MARVELD1	Q9BSK0	173 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms