RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RIN1Q13671 783 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 TMEM249Q2WGJ8 235 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 PCGF3Q3KNV8 242 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 TMEM255AQ5JRV8 349 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 C1orf146Q5VVC0 180 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 TMEM154Q6P9G4 183 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 COG8Q96MW5 612 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 CDADC1Q9BWV3 514 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 BPESC1Q9GZL8 116 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 CGGBP1Q9UFW8 167 aaPredicted RBP21.26■□□□□ 0.99
PMS1-220ENST00000618056 ANK3Q12955 4377 aaKnown RBP21.25■□□□□ 0.99
PMS1-220ENST00000618056 RIIAD1A6NNX1 92 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 CD5LO43866 347 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 TIPRLO75663 272 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 CIB2O75838 187 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 HOXB4P17483 251 aaPredicted RBP21.25■□□□□ 0.99
PMS1-220ENST00000618056 RGS6P49758 472 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 MMP15P51511 669 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 SHQ1Q6PI26 577 aaKnown RBP21.25■□□□□ 0.99
PMS1-220ENST00000618056 CFAP77Q6ZQR2 320 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 LINC00346Q8IVM7 164 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 OR9Q1Q8NGQ5 310 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 OR2AJ1Q8NGZ0 328 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 ZNRF4Q8WWF5 429 aa21.25■□□□□ 0.99
PMS1-220ENST00000618056 DUS3LQ96G46 650 aaKnown RBP21.25■□□□□ 0.99
PMS1-220ENST00000618056 NCR1O76036 304 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 DBHP09172 617 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 OSMP13725 252 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 ZNF823P16415 610 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 ZNF3P17036 446 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 PRKACGP22612 351 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 LIPAP38571 399 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 ECH1Q13011 328 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 KRTAP27-1Q3LI81 207 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 SLC27A4Q6P1M0 643 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 RDH5Q92781 318 aa21.24■□□□□ 0.99
PMS1-220ENST00000618056 TLX2O43763 284 aaPredicted RBP21.23■□□□□ 0.99
PMS1-220ENST00000618056 SPI1P17947 270 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 MAGEB1P43366 347 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 GGTLC2Q14390 218 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 IQCF1Q8N6M8 205 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 OR51L1Q8NGJ5 315 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 DNAJC9Q8WXX5 260 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 CHODLQ9H9P2 273 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 PNRC2Q9NPJ4 139 aaKnown RBP21.23■□□□□ 0.99
PMS1-220ENST00000618056 CYSLTR2Q9NS75 346 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 STARD10Q9Y365 291 aa21.23■□□□□ 0.99
PMS1-220ENST00000618056 TANC2Q9HCD6 1990 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 PLSCR5A0PG75 271 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 LYNX1G3V0Z9 82 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 LYNX1P0DP58 116 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 ACHEP22303 614 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 BLVRAP53004 296 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 PSG7Q13046 419 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 PCK2Q16822 640 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 RSPO1Q2MKA7 263 aaPredicted RBP21.22■□□□□ 0.99
PMS1-220ENST00000618056 ATG16L2Q8NAA4 619 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 POM121Q96HA1 1249 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 ATF6BQ99941 703 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 POFUT1Q9H488 388 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 COMMD3-BMI1R4GMX3 469 aa21.22■□□□□ 0.99
PMS1-220ENST00000618056 IGHV4-61A0A0C4DH41 118 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 TVP23AA6NH52 213 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 GYPBP06028 91 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 ADH4P08319 380 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 TACSTD2P09758 323 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 KITLGP21583 273 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 POU1F1P28069 291 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 FMO3P31513 532 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 ZNF81P51508 661 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 CCL8P80075 99 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 CCNIQ14094 377 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 GINS1Q14691 196 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 ATP6AP1Q15904 470 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 FAM209AQ5JX71 171 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 ACSM5Q6NUN0 579 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 GTF3AQ92664 365 aaKnown RBP21.21■□□□□ 0.99
PMS1-220ENST00000618056 APOBEC3DQ96AK3 386 aaPredicted RBP21.21■□□□□ 0.99
PMS1-220ENST00000618056 MAP6Q96JE9 813 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 PITX2Q99697 317 aa21.21■□□□□ 0.99
PMS1-220ENST00000618056 INAFM1C9JVW0 142 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 ZNF23P17027 643 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 COL8A2P25067 703 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 CDK5Q00535 292 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 ZMAT1Q5H9K5 638 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 LINC01590Q5TEZ4 76 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 FAHD1Q6P587 224 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 LYPD4Q6UWN0 246 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 COLCA1Q6ZS62 124 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 OR5L1Q8NGL2 311 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 OR5K1Q8NHB7 308 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 AP4S1Q9Y587 144 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 IGHV1-46P01743 117 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 CLUP10909 449 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 PPP2R2BQ00005 443 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 TEX30Q5JUR7 227 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 PTP4A1Q93096 173 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 YIPF5Q969M3 257 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 HAVCR1Q96D42 359 aa21.2■□□□□ 0.98
PMS1-220ENST00000618056 WDR76Q9H967 626 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms