RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SCN1AP35498 2009 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 COL4A5P29400 1685 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 TGFBR1P36897 503 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 TOMM34Q15785 309 aaPredicted RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 TMEM92Q6UXU6 159 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 TMEM200AQ86VY9 491 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 MFSD4AQ8N468 514 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 NXF5Q9H1B4 397 aaKnown RBP13.36□□□□□ -0.27
SNPH-203ENST00000614659 TAS2R4Q9NYW5 299 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 B3GALT5Q9Y2C3 310 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 SCGB1D1O95968 90 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 GABRB1P18505 474 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 MYBPHQ13203 477 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 HES3Q5TGS1 186 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 CMTM4Q8IZR5 234 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 GABRG1Q8N1C3 465 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
SNPH-203ENST00000614659 A0A087WUJ7 227 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ADAM10O14672 748 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 RAB4AP20338 218 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 STAC2Q6ZMT1 411 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 OR51S1Q8NGJ8 323 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 KCNJ15Q99712 375 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 JAM3Q9BX67 310 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 SLC25A32Q9H2D1 315 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 C12orf10Q9HB07 376 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ACKR4Q9NPB9 350 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 RAG2P55895 527 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 SPNS2Q8IVW8 549 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 RDH10Q8IZV5 341 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 CCL4L1Q8NHW4 92 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 G3V3Y1 287 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 EPXP11678 715 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 TBXA2RP21731 343 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 IL3RAP26951 378 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 SERPINF1P36955 418 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 CRYBB2P43320 205 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 GFERP55789 205 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 SLC25A30Q5SVS4 291 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 CCDC71Q8IV32 467 aaPredicted RBP13.35□□□□□ -0.27
SNPH-203ENST00000614659 GPR32P1Q8NGA4 272 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 MARC2Q969Z3 335 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 SLAMF6Q96DU3 332 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 FAM173AQ9BQD7 235 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 PIGMQ9H3S5 423 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ZCCHC4Q9H5U6 513 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 A0A1B0GTQ1 180 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 MSTNO14793 375 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ARR3P36575 388 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 GLYR1Q49A26 553 aaPredicted RBP13.35□□□□□ -0.27
SNPH-203ENST00000614659 GUSBP11Q6P575 273 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ANGPTL5Q86XS5 388 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 INTS12Q96CB8 462 aaKnown RBP13.35□□□□□ -0.27
SNPH-203ENST00000614659 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 M0QYG6 137 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ICOSLGO75144 302 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 CBR3O75828 277 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 APEHP13798 732 aaKnown RBP13.35□□□□□ -0.27
SNPH-203ENST00000614659 LAP3P28838 519 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 GZMKP49863 264 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 ZNF266Q14584 549 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 HYAL4Q2M3T9 481 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 PRSS45Q7RTY3 260 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 C11orf40Q8WZ69 217 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 PLA2G12AQ9BZM1 189 aa13.35□□□□□ -0.27
SNPH-203ENST00000614659 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNPH-203ENST00000614659 IL5P05113 134 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 FLI1Q01543 452 aaPredicted RBP13.34□□□□□ -0.27
SNPH-203ENST00000614659 FBXW12Q6X9E4 464 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 LGI3Q8N145 548 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 SEMA6DQ8NFY4 1073 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OR4Q3Q8NH05 313 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OR52N5Q8NH56 324 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 APH1BQ8WW43 257 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 DCLRE1CQ96SD1 692 aaKnown RBP13.34□□□□□ -0.27
SNPH-203ENST00000614659 HINT2Q9BX68 163 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 IGHV1OR21-1A0A087WYE8 117 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 TNFSF12O43508 249 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 PLPP2O43688 288 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 ABHD16AO95870 558 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 ZNF44P15621 663 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 CNR1P21554 472 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 SOX18P35713 384 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 ZFP82Q8N141 532 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 SLC30A7Q8NEW0 376 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OR6K3Q8NGY3 331 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 OXGR1Q96P68 337 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 K7EQS6 105 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 TPPPO94811 219 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 FJX1Q86VR8 437 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 UCK1Q9HA47 277 aa13.34□□□□□ -0.27
SNPH-203ENST00000614659 SDHAF2Q9NX18 166 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms