RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PTTG3PQ9NZH4 202 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 PURGQ9UJV8 347 aaKnown RBP16.34■□□□□ 0.21
CTSA-217ENST00000607482 STARD10Q9Y365 291 aa16.34■□□□□ 0.21
CTSA-217ENST00000607482 PHF1O43189 567 aaPredicted RBP16.33■□□□□ 0.2
CTSA-217ENST00000607482 GAAP10253 952 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 TNFRSF1AP19438 455 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 HMGA2P52926 109 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 ECH1Q13011 328 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 LCN8Q6JVE9 175 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 ACSM5Q6NUN0 579 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 FAHD2BQ6P2I3 314 aaPredicted RBP16.33■□□□□ 0.2
CTSA-217ENST00000607482 ZNF771Q7L3S4 317 aaPredicted RBP16.33■□□□□ 0.2
CTSA-217ENST00000607482 LINC00346Q8IVM7 164 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 ATG16L2Q8NAA4 619 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 OR2T4Q8NH00 348 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 APOBEC3DQ96AK3 386 aaPredicted RBP16.33■□□□□ 0.2
CTSA-217ENST00000607482 TMEM186Q96B77 213 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 FAHD2AQ96GK7 314 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 COQ7Q99807 217 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 THTPAQ9BU02 230 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 RACGAP1Q9H0H5 632 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 ATPIF1Q9UII2 106 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 ANK3Q12955 4377 aaKnown RBP16.33■□□□□ 0.2
CTSA-217ENST00000607482 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
CTSA-217ENST00000607482 IGLV1-36A0A0B4J1U3 117 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 OR6C68A6NDL8 312 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 F5H5K5 113 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 DCTN6O00399 190 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 WNT9BO14905 357 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 GASTP01350 101 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 DBHP09172 617 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 PPP1R8Q12972 351 aaKnown RBP16.32■□□□□ 0.2
CTSA-217ENST00000607482 OR2T5Q6IEZ7 315 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 SLC26A10Q8NG04 563 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 OR2T29Q8NH02 315 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 HAVCR1Q96D42 359 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 ZNF582Q96NG8 517 aaPredicted RBP16.32■□□□□ 0.2
CTSA-217ENST00000607482 HCAR1Q9BXC0 346 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 ZNF665Q9H7R5 613 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 UBAP1Q9NZ09 502 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 PCDHB10Q9UN67 800 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 WIPI2Q9Y4P8 454 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 LHFPL6Q9Y693 200 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 CACNG2Q9Y698 323 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 ATRQ13535 2644 aa16.32■□□□□ 0.2
CTSA-217ENST00000607482 J3QW42 95 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 IFNGP01579 166 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 RAC2P15153 192 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 COX10Q12887 443 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 MALLQ13021 153 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 SCGB2A2Q13296 93 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 HLXQ14774 488 aaPredicted RBP16.31■□□□□ 0.2
CTSA-217ENST00000607482 MICAQ29983 383 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 OR5AS1Q8N127 324 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 ASB9Q96DX5 294 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 C1orf159Q96HA4 380 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 ATF6BQ99941 703 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 BTBD10Q9BSF8 475 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 TSSK6Q9BXA6 273 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 POFUT1Q9H488 388 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 BAIAP2Q9UQB8 552 aa16.31■□□□□ 0.2
CTSA-217ENST00000607482 TRAV20A0A0B4J274 112 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 TCRBV5S2A0A599 114 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 FAM157AC9JC47 383 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 GYG2O15488 501 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 RAP2AP10114 183 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 KITLGP21583 273 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 PYCR1P32322 319 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 MAGEA2P43356 314 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 TAF13Q15543 124 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 LIPNQ5VXI9 398 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 SLC27A4Q6P1M0 643 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 RASSF6Q6ZTQ3 369 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 TEX29Q8N6K0 151 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 CYB561A3Q8NBI2 242 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 OR2T33Q8NG76 320 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 SPATA3Q8NHX4 192 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 ST7LQ8TDW4 575 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 SPTSSAQ969W0 71 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 OTULINQ96BN8 352 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 CLPTM1LQ96KA5 538 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 C1orf21Q9H246 121 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 KCNG2Q9UJ96 466 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 KLHL21Q9UJP4 597 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 PPP1R3CQ9UQK1 317 aa16.3■□□□□ 0.2
CTSA-217ENST00000607482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.27e-9■■■■□ 24.6
CTSA-217ENST00000607482 RIIAD1A6NNX1 92 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 H3BN98 237 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 SOX14O95416 240 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 CST1P01037 141 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 LCATP04180 440 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 CD55P08174 381 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 ADH4P08319 380 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 SBK2P0C263 348 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 SELEP16581 610 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 THBS2P35442 1172 aa16.29■□□□□ 0.2
CTSA-217ENST00000607482 SLC6A9P48067 706 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms