RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 XKRY2A2RUG3 117 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 ZNF716A6NP11 495 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 C9JVG2 144 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 SMKR1H3BMG3 65 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 SIRPB1O00241 398 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 RNF13O43567 381 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CDC40O60508 579 aaKnown RBP eCLIP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 WBP4O75554 376 aaKnown RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 IGHDP01880 384 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 ARG1P05089 322 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 ZNF735P0CB33 412 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CT45A6P0DMU7 189 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CT45A5P0DMU8 189 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CT45A7P0DMV0 189 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 IL1RNP18510 177 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 U2AF2P26368 475 aaKnown RBP eCLIP2.45□□□□□ -2.025e-7■■□□□ 11.8
UBE2E3-212ENST00000602888 EIF3EP60228 445 aaKnown RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 RAB10P61026 200 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CCNA1P78396 465 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CRADDP78560 199 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 PRR3P79522 188 aaKnown RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CDK5Q00535 292 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 SP4Q02446 784 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 MPV17L2Q567V2 206 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CT45A1Q5HYN5 189 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 REEP3Q6NUK4 255 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 UNQ9165/PRO28630Q6UXU0 137 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CMTM1Q8IZ96 169 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 OR4A4PQ8NGN8 299 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CT45A3Q8NHU0 189 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 EEF1AKMT3Q96AZ1 226 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 NEUROG2Q9H2A3 272 aa2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 FBXO6Q9NRD1 293 aaPredicted RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 CCDC59Q9P031 241 aaKnown RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
UBE2E3-212ENST00000602888 GOLGA8OA6NCC3 632 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 GOLGA8NF8WBI6 632 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 K7EM74 188 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 UBXN8O00124 270 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 SLC22A5O76082 557 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 SEMA3DO95025 777 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 SERPINE2P07093 398 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 ATF6P18850 670 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 CHRNA6Q15825 494 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 MRPL23Q16540 153 aaKnown RBP2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 RAET1LQ5VY80 246 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 C22orf42Q6IC83 251 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 MRPL55Q7Z7F7 128 aaKnown RBP2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 NPWQ8N729 165 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 LRRC52Q8N7C0 313 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 NUBPLQ8TB37 319 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 RAB3IL1Q8TBN0 382 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 SLC38A4Q969I6 547 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 ECHDC3Q96DC8 303 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 PLIN2Q99541 437 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 FGF23Q9GZV9 251 aaPredicted RBP2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 PITPNC1Q9UKF7 332 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 PALLDQ8WX93 1383 aa2.44□□□□□ -2.02
UBE2E3-212ENST00000602888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.44□□□□□ -2.029e-7■■■□□ 16.5
UBE2E3-212ENST00000602888 SCN1AP35498 2009 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CENPVL3A0A0U1RRI6 287 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 C5orf63A6NC05 138 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 H7C417 338 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 NDUFAB1O14561 156 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 SCAMP2O15127 329 aaKnown RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 NVLO15381 856 aaKnown RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 RAD51CO43502 376 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CHST1O43916 411 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CLDN11O75508 207 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 EIF2S2P20042 333 aaKnown RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 ME2P23368 584 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CALRP27797 417 aaKnown RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 TAS2R31P59538 309 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 HMGN5P82970 282 aaKnown RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 KIR2DS1Q14954 304 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 PSMD5Q16401 504 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CMC1Q7Z7K0 106 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CALHM3Q86XJ0 350 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 NKAIN4Q8IVV8 208 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CDH26Q8IXH8 852 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 TMEM256Q8N2U0 113 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 GTPBP8Q8N3Z3 284 aaPredicted RBP2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 OR11H7Q8NGC8 314 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 OR52E2Q8NGJ4 325 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 APH1BQ8WW43 257 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 CAPSLQ8WWF8 208 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 ANKRD60Q9BZ19 345 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 MTFP1Q9UDX5 166 aa2.43□□□□□ -2.02
UBE2E3-212ENST00000602888 DENND4AQ7Z401 1863 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 TRBV11-1A0A0K0K1C0 115 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 K7EMT4 169 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 LSM1O15116 133 aaKnown RBP2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 HLA-DQB1P01920 261 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 TGM3Q08188 693 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 SELENBP1Q13228 472 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 PGGHGQ32M88 737 aa2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 RNASE13Q5GAN3 156 aaKnown RBP2.42□□□□□ -2.02
UBE2E3-212ENST00000602888 ARMC12Q5T9G4 340 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms