RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CDC42EP3Q9UKI2 254 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 C14orf166Q9Y224 244 aaKnown RBP8□□□□□ -1.13
COMMD3-215ENST00000602574 HS3ST3B1Q9Y662 390 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NPIPA5A0A0B4J1W7 369 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ZNF814B7Z6K7 855 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 UMAD1C9J7I0 102 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NPIPA5E9PKD4 350 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NPIPA3F8WFD2 350 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
COMMD3-215ENST00000602574 MT-CO2P00403 227 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 CXCL1P09341 107 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 VSIG10L2P0DP72 767 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GSTM3P21266 225 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 PSMB5P28074 263 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 CNR2P34972 360 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SOX18P35713 384 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SULT1A2P50226 295 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 BLKP51451 505 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 MVDP53602 400 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 FOXL2P58012 376 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 MLF1P58340 268 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 CKS1BP61024 79 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SLC6A3Q01959 620 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ID2Q02363 134 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 C2orf68Q2NKX9 166 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GAB4Q2WGN9 574 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 TPTE2P1Q5T6R2 138 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GPR157Q5UAW9 335 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NIT1Q86X76 327 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 STPG4Q8N801 248 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 INO80EQ8NBZ0 244 aaPredicted RBP8□□□□□ -1.13
COMMD3-215ENST00000602574 ACVR1CQ8NER5 493 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 OR4K14Q8NGD5 310 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 OR52L2PQ8NGH6 319 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 C15orf40Q8WUR7 153 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 CIB3Q96Q77 187 aaPredicted RBP8□□□□□ -1.13
COMMD3-215ENST00000602574 OMDQ99983 421 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 VCX2Q9H322 139 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SLC2A4RGQ9NR83 387 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 PADI3Q9ULW8 664 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NPIPA1Q9UND3 350 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ARL5AQ9Y689 179 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 COL16A1Q07092 1604 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TRBV6-7A0A0A0MS04 114 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM272A0A1B0GTI8 110 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CD8B2A6NJW9 211 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 MT-ATP6P00846 226 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 ZNF19P17023 458 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 GPD1P21695 349 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 MMP11P24347 488 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CHATP28329 748 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 MIPP30301 263 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 RABGGTBP53611 331 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 WNT3AP56704 352 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 HIST1H3AP68431 136 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 BDH1Q02338 343 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 BAXQ07812 192 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CEBPEQ15744 281 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 PRTGQ2VWP7 1150 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 PGGHGQ32M88 737 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 RAB41Q5JT25 222 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 LY6G6FQ5SQ64 297 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SFRP4Q6FHJ7 346 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FAM71F2Q6NXP2 309 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 RPL22L1Q6P5R6 122 aaKnown RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FIGLAQ6QHK4 219 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM205Q6UW68 189 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TTLL10Q6ZVT0 673 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FRMD1Q8N878 549 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 ARL14EPQ8N8R7 260 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 AMER3Q8N944 861 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 OR52L1Q8NGH7 329 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 OR5AK3PQ8NH89 298 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 RNF133Q8WVZ7 376 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 DVL3Q92997 716 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 ANKRD9Q96BM1 317 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FER1L6-AS2Q96M78 137 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SGPP1Q9BX95 441 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 G6PC2Q9NQR9 355 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FGF21Q9NSA1 209 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CLN8Q9UBY8 286 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TESQ9UGI8 421 aaKnown RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SLC13A4Q9UKG4 626 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 TBX21Q9UL17 535 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 RCE1Q9Y256 329 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FARSAQ9Y285 508 aaKnown RBP7.99□□□□□ -1.13
COMMD3-215ENST00000602574 DSPPQ9NZW4 1301 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SHISA3A0PJX4 238 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SMIM30A4D0T7 59 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 B4DEV8 164 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 K7EPK0 472 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 LRATO95237 230 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 SMIM17P0DL12 118 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 DPP4P27487 766 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 DCTDP32321 178 aa7.99□□□□□ -1.13
COMMD3-215ENST00000602574 FAUP35544 74 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms