RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 COMMD4Q9H0A8 199 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 NELFAQ9H3P2 528 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 ZCCHC4Q9H5U6 513 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 CALHM2Q9HA72 323 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 BCO1Q9HAY6 547 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 ELOVL3Q9HB03 270 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 NPDC1Q9NQX5 325 aaPredicted RBP10.15□□□□□ -0.78
ZNF548-211ENST00000600927 ACOXLQ9NUZ1 547 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 CLCF1Q9UBD9 225 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 IKZF2Q9UKS7 526 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 CAMK2AQ9UQM7 478 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 ZNF175Q9Y473 711 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 NAV2Q8IVL1 2488 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 KIAA1549Q9HCM3 1950 aa10.15□□□□□ -0.78
ZNF548-211ENST00000600927 APCP25054 2843 aa10.15□□□□□ -0.79
ZNF548-211ENST00000600927 CSMD2Q7Z408 3487 aa10.15□□□□□ -0.79
ZNF548-211ENST00000600927 IGKV1D-43A0A0B4J1Z2 117 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 ZNF879B4DU55 563 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SPARCP09486 303 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 UCHL1P09936 223 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 CD40LGP29965 261 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SDC2P34741 201 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 PSMD7P51665 324 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 BMXP51813 675 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 MRPS34P82930 218 aaKnown RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 FMODQ06828 376 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SLC3A1Q07837 685 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 EIF2B1Q14232 305 aaKnown RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SF3B4Q15427 424 aaKnown RBP eCLIP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SLC25A35Q3KQZ1 300 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 ZMAT1Q5H9K5 638 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 FAM27BQ5VT28 67 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 CHMP1BQ7LBR1 199 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 AAED1Q7RTV5 226 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 RFLNBQ8N5W9 214 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 ZFP41Q8N8Y5 198 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 RELL2Q8NC24 303 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 OR2AJ1Q8NGZ0 328 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 OR2G2Q8NGZ5 317 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 OR5AK2Q8NH90 309 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SMAP2Q8WU79 429 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 MAP6Q96JE9 813 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 WDFY2Q96P53 400 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 ZNF385AQ96PM9 386 aaKnown RBP10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SPOCK3Q9BQ16 436 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 RNF167Q9H6Y7 350 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 GLRX2Q9NS18 164 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 SLCO1C1Q9NYB5 712 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 KLHDC2Q9Y2U9 406 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 ALPK2Q86TB3 2170 aa10.14□□□□□ -0.79
ZNF548-211ENST00000600927 LRBAP50851 2863 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 TRBV5-5A0A0J9YX44 114 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 NKX2-6A6NCS4 301 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 OR4C45A6NMZ5 311 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 FAM90A27PA6NNH2 459 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 PRR32B1ATL7 298 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 CASKO14936 926 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 APOC1P02654 83 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 ISG15P05161 165 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 OR8G3PP0DMU2 310 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 CD8BP10966 210 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 PRF1P14222 555 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MSR1P21757 451 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MYL9P24844 172 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 TGFBR1P36897 503 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 OPRL1P41146 370 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 RPS11P62280 158 aaKnown RBP eCLIP10.13□□□□□ -0.79
ZNF548-211ENST00000600927 HIST1H3AP68431 136 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 FBXL19-AS1Q494R0 122 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 Q499Y3 187 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 HIST2H3PS2Q5TEC6 136 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MZT2AQ6P582 158 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 ZNF704Q6ZNC4 412 aaPredicted RBP10.13□□□□□ -0.79
ZNF548-211ENST00000600927 HIST2H3AQ71DI3 136 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 DCXRQ7Z4W1 244 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 CEACAM19Q7Z692 300 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.13□□□□□ -0.79
ZNF548-211ENST00000600927 WDFY1Q8IWB7 410 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 UBQLNLQ8IYU4 475 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 C9orf106Q8NAJ2 232 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 GJC3Q8NFK1 279 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 GPR148Q8TDV2 347 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MARVELD3Q96A59 401 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 TRIB1Q96RU8 372 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MRI1Q9BV20 369 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MOB1AQ9H8S9 216 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 AKIP1Q9NQ31 210 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 FRRS1LQ9P0K9 344 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 UGT2A1Q9Y4X1 527 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 R4GMQ9 66 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 MED12Q93074 2177 aa10.13□□□□□ -0.79
ZNF548-211ENST00000600927 IGHV3-15A0A0B4J1V0 119 aa10.12□□□□□ -0.79
ZNF548-211ENST00000600927 ZNF878C9JN71 531 aa10.12□□□□□ -0.79
ZNF548-211ENST00000600927 H0YC42 278 aa10.12□□□□□ -0.79
ZNF548-211ENST00000600927 PDCD5O14737 125 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms