RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 FAPQ12884 760 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 NRN1LQ496H8 165 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 C9orf135Q5VTT2 229 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 KLHL24Q6TFL4 600 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 SEM1Q6ZVN7 128 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 MBD3L2Q8NHZ7 208 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 PHYHIPQ92561 330 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 MALT1Q9UDY8 824 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 FAM215AQ9Y5M1 114 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 R4GMQ9 66 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 SHISA3A0PJX4 238 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 SMIM30A4D0T7 59 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 BMP4P12644 408 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 ABOP16442 354 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 CCR9P51686 369 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 MFGE8Q08431 387 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 KLRB1Q12918 225 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 WDR38Q5JTN6 314 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 FAM27D1Q5T7N8 215 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 C1orf185Q5T7R7 199 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 CROCCP3Q8IVE0 287 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 ZNF676Q8N7Q3 588 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 OR14A2Q96R54 314 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 PPIL3Q9H2H8 161 aaKnown RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 GTF2A1LQ9UNN4 478 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 ZNF879B4DU55 563 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 UCHL1P09936 223 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 MAPK3P27361 379 aaPredicted RBP13.31□□□□□ -0.28
VRK3-207ENST00000594092 DCTDP32321 178 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 CCDC92Q53HC0 331 aaPredicted RBP13.31□□□□□ -0.28
VRK3-207ENST00000594092 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 TFAP2EQ6VUC0 442 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 SKA3Q8IX90 412 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 CNEP1R1Q8N9A8 125 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 RGP1Q92546 391 aaPredicted RBP13.31□□□□□ -0.28
VRK3-207ENST00000594092 CEP19Q96LK0 163 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
VRK3-207ENST00000594092 SLC22A13Q9Y226 551 aa13.31□□□□□ -0.28
VRK3-207ENST00000594092 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 J3QRK9 145 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 RGS5O15539 181 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 NCR1O76036 304 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 TOXO94900 526 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 FARS2O95363 451 aaKnown RBP13.3□□□□□ -0.28
VRK3-207ENST00000594092 PATE4P0C8F1 98 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 CFL1P23528 166 aaKnown RBP13.3□□□□□ -0.28
VRK3-207ENST00000594092 CAV3P56539 151 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 FOXF2Q12947 444 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 TAF13Q15543 124 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 HSD17B12Q53GQ0 312 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 SLC16A14Q7RTX9 510 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
VRK3-207ENST00000594092 MFSD4AQ8N468 514 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 RPRMLQ8N4K4 120 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 IL17RDQ8NFM7 739 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 FGFBP3Q8TAT2 258 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 PPP1R14AQ96A00 147 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 NIPAL2Q9H841 368 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 G6PC2Q9NQR9 355 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 SLC5A6Q9Y289 635 aa13.3□□□□□ -0.28
VRK3-207ENST00000594092 TMEM269A0A1B0GVZ9 245 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 A0A1W2PPK0 400 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 LOC110117498-PIK3R3F6TDL0 507 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 CTDSP2O14595 271 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ITGA5P08648 1049 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 HOXD4P09016 255 aaPredicted RBP13.29□□□□□ -0.28
VRK3-207ENST00000594092 ZNF32P17041 273 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 HSD11B1P28845 292 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 MPGP29372 298 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 MMP16P51512 607 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 Q499Y3 187 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ELFN2Q5R3F8 820 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 SYT9Q86SS6 491 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 GPR148Q8TDV2 347 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 ATF6BQ99941 703 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 PALMDQ9NP74 551 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 CMAHPQ9Y471 501 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 SPTA1P02549 2419 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 A0A096LPE4 126 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 A0A1W2PPZ6 126 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 TNFSF13O75888 250 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 IL18BPO95998 194 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 OCM2P0CE71 109 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 PRKXP51817 358 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 PER3P56645 1201 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 PCBD1P61457 104 aa13.29□□□□□ -0.28
VRK3-207ENST00000594092 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms