RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SHISA2Q6UWI4 295 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 HIST2H3AQ71DI3 136 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 KLBQ86Z14 1044 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 PARP8Q8N3A8 854 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 KLHL36Q8N4N3 616 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 OR1F12Q8NHA8 337 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 UPRTQ96BW1 309 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 TSSK2Q96PF2 358 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 GPX7Q96SL4 187 aaPredicted RBP8.91□□□□□ -0.98
USE1-203ENST00000593597 TMEM246Q9BRR3 403 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 FUZQ9BT04 418 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 FNDC11Q9BVV2 318 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 WDR76Q9H967 626 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 NRIP3Q9NQ35 241 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 LHFPL6Q9Y693 200 aa8.91□□□□□ -0.98
USE1-203ENST00000593597 IGLV1-36A0A0B4J1U3 117 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 TRAV40A0A0B4J280 105 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 IGHV2-70DA0A0C4DH43 119 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 F5H5P2 479 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 CLDN34H7C241 214 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 CXCR6O00574 342 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 SLC16A7O60669 478 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 FCN3O75636 299 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ZNF682O95780 498 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 SERPINA1P01009 418 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 RAC2P15153 192 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 H2AFXP16104 143 aaPredicted RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 NCK1P16333 377 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 TNFRSF1AP19438 455 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 MDKP21741 143 aaPredicted RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 SDHAP31040 664 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 RPL4P36578 427 aaKnown RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 OMPP47874 163 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 SRSF4Q08170 494 aaKnown RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 KCNMB1Q16558 191 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ZNF404Q494X3 552 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ANKDD1AQ495B1 522 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 IFI44LQ53G44 452 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ESCO2Q56NI9 601 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 CORO6Q6QEF8 472 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 LYPD2Q6UXB3 125 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ZNF730Q6ZMV8 503 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ZNF841Q6ZN19 808 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 COLCA1Q6ZS62 124 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 ZER1Q7Z7L7 766 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 MOGAT3Q86VF5 341 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 RNF113BQ8IZP6 322 aaKnown RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 FAM86B1Q8N7N1 296 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 PCYOX1LQ8NBM8 494 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 BHLHE23Q8NDY6 225 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 C19orf18Q8NEA5 215 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 OR8G5Q8NG78 346 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 PTP4A1Q93096 173 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 SLC30A2Q9BRI3 323 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 WACQ9BTA9 647 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 MRI1Q9BV20 369 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 CDADC1Q9BWV3 514 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 NUAK2Q9H093 628 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 NMNAT1Q9HAN9 279 aaPredicted RBP8.9□□□□□ -0.98
USE1-203ENST00000593597 GRHPRQ9UBQ7 328 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 OR5V1Q9UGF6 321 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 LRCH1Q9Y2L9 728 aa8.9□□□□□ -0.98
USE1-203ENST00000593597 TRBV4-1A0A0J9YWV2 114 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 C5orf63A6NC05 138 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 IQCF6A8MYZ5 107 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 C22orf46C9J442 243 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 SOCS2O14508 198 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 AHCYL1O43865 530 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 KHDRBS3O75525 346 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 TXNDC12O95881 172 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 HLA-DPB1P04440 258 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 VIMP08670 466 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 PSKH1P11801 424 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 RPS2P15880 293 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 TUBG1P23258 451 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 TNFSF4P23510 183 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 OMGP23515 440 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 GSK3BP49841 420 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 SLC7A2P52569 658 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 RAD23AP54725 363 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 RELBQ01201 579 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 GUCY1A3Q02108 690 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 MAB21L1Q13394 359 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 MAPRE2Q15555 327 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 CLEC12AQ5QGZ9 265 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 ARL9Q6T311 187 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 CFAP77Q6ZQR2 320 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 NAA40Q86UY6 237 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 TREML1Q86YW5 311 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 GLB1L2Q8IW92 636 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 FITM2Q8N6M3 262 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 OR52E2Q8NGJ4 325 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 RSRC1Q96IZ7 334 aaKnown RBP8.89□□□□□ -0.99
USE1-203ENST00000593597 C7orf34Q96L11 122 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 PRDM13Q9H4Q3 707 aa8.89□□□□□ -0.99
USE1-203ENST00000593597 RERGLQ9H628 205 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms