RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SLC35D1Q9NTN3 355 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 NTNG1Q9Y2I2 539 aa13.33□□□□□ -0.28
SMARCA4-214ENST00000589677 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ITGB4P16144 1822 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 KIR2DS1A0A191URI9 304 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 PLA2G10O15496 165 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 LIMS3P0CW19 117 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 LIMS4P0CW20 117 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 KIR2DS4P43632 304 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 LBX1P52954 281 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ECH1Q13011 328 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 HABP2Q14520 560 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 KIR2DS1Q14954 304 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MORN1Q5T089 497 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 TRILQ7L0X0 811 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ADIPOR2Q86V24 386 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 NUDT22Q9BRQ3 303 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 PLA2G12AQ9BZM1 189 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 PRO1933Q9H354 126 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 RARRES3Q9UL19 164 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 A4GNTQ9UNA3 340 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 CLDN34H7C241 214 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MBTPS2O43462 519 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MMP7P09237 267 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 NAT2P11245 290 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 BIDP55957 195 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 SLC17A1Q14916 467 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ZNF528Q3MIS6 628 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 LBHQ53QV2 105 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MED25Q71SY5 747 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 LYRM4Q9HD34 91 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 TRAPPC2LQ9UL33 140 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 BTAF1O14981 1849 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 HCRTR1O43613 425 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 OVCH2Q7RTZ1 564 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 OR5M9Q8NGP3 310 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 OR14A16Q8NHC5 309 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ACTR3CQ9C0K3 210 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 RAB18Q9NP72 206 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 HAO2Q9NYQ3 351 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 COA3Q9Y2R0 106 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 CCDC187A0A096LP49 1063 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 A0A1W2PPQ1 181 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 PRSS38A1L453 326 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 HNRNPA3P51991 378 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 ZNF574Q6ZN55 896 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 GTF2H5Q6ZYL4 71 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 CLSTN3Q9BQT9 956 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 CXCL16Q9H2A7 254 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 MIXL1Q9H2W2 232 aa13.32□□□□□ -0.28
SMARCA4-214ENST00000589677 AVPR2P30518 371 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 S100A7AQ86SG5 101 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 MS4A6EQ96DS6 147 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 DNAJB11Q9UBS4 358 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 SLC5A6Q9Y289 635 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 COL18A1P39060 1754 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 ANKRD20A5PA0PJZ0 165 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 IRF2P14316 349 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 HIST1H3AP68431 136 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 IFITM2Q01629 132 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 MZT1Q08AG7 82 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 IL10RAQ13651 578 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 COL9A2Q14055 689 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 ZNF542PQ5EBM4 170 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 ZNF761Q86XN6 746 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 HGDQ93099 445 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 LCORQ96JN0 433 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 M0QZK8 103 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 GGCTO75223 188 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 CD79AP11912 226 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 CYBAP13498 195 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 HTR5AP47898 357 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 VWA2Q5GFL6 755 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 DMBX1Q8NFW5 382 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 OR11H7Q8NGC8 314 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 RPUSD4Q96CM3 377 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 UCK1Q9HA47 277 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 TRBV5-4A0A0C4DH59 114 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 OLFM2O95897 454 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 CTSAP10619 480 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 OR2A2Q6IF42 318 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 LILRA3Q8N6C8 439 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 OR4A16Q8NH70 328 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 LILRB1Q8NHL6 650 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 ABHD1Q96SE0 405 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 PRRX2Q99811 253 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 WWTR1Q9GZV5 400 aa13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-214ENST00000589677 TUSC2O75896 110 aa13.3□□□□□ -0.28
SMARCA4-214ENST00000589677 MVDP53602 400 aa13.3□□□□□ -0.28
SMARCA4-214ENST00000589677 GUCA2AQ02747 115 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms