RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ANKRD19PQ9H560 264 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ELOVL6Q9H5J4 265 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PTGES2Q9H7Z7 377 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ASCL3Q9NQ33 180 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LHX9Q9NQ69 397 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZC4H2Q9NQZ6 224 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC17A5Q9NRA2 495 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZDHHC18Q9NUE0 388 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GID8Q9NWU2 228 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CD274Q9NZQ7 290 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 STOX2Q9P2F5 926 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CHRNA9Q9UGM1 479 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NUP50Q9UKX7 468 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRPF19Q9UMS4 504 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PDZD2O15018 2839 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PTPRZ1P23471 2315 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SAGE2PA6NJ88 616 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MLNRO43193 412 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 HCRTO43612 131 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ALOX12BO75342 701 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TNFSF15O95150 251 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 VAMP5O95183 116 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FCGR3AP08637 254 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CSF3P09919 207 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IVDP26440 423 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ELK3P41970 407 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 HLCSP50747 726 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BLVRAP53004 296 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 METAP1P53582 386 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EMP2P54851 167 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EMX2Q04743 252 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 STX5Q13190 355 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SRSF5Q13243 272 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LPAL2Q16609 132 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NKAIN1Q4KMZ8 207 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC25A53Q5H9E4 307 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FHL5Q5TD97 284 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL13AP3Q6NVV1 102 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM151BQ6UXP7 276 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF550Q7Z398 422 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZFAND4Q86XD8 727 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CACUL1Q86Y37 369 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CRLF3Q8IUI8 442 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZBED8Q8IZ13 594 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BBS1Q8NFJ9 593 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 STEAP2Q8NFT2 490 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F17Q8NGA8 305 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1L4Q8NGR5 311 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F5Q8NH21 305 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4C3Q8NH37 302 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LIPHQ8WWY8 451 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TCEAL3Q969E4 200 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPL48Q96GC5 212 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C17orf77Q96MU5 243 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4F4Q96R69 305 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DCTN5Q9BTE1 182 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RBM24Q9BX46 236 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ALG9Q9H6U8 611 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IL1RL2Q9HB29 575 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LRTM1Q9HBL6 345 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 APMAPQ9HDC9 416 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ESM1Q9NQ30 184 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TECRQ9NZ01 308 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FLVCR2Q9UPI3 526 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MRPS28Q9Y2Q9 187 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LRP12Q9Y561 859 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM131Q92545 1883 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PTPN13Q12923 2485 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 COL6A6A6NMZ7 2263 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NSG1A0A0A6YYJ2 146 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TRBV5-5A0A0J9YX44 114 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP6AP2A0A1C7CYW4 349 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FRG2CA6NGY1 282 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SMIM1B2RUZ4 78 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GALR3O60755 368 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 STK17BO94768 372 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TXNDC12O95881 172 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NGFP01138 241 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GIMD1P0DJR0 217 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GFAPP14136 432 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FCGR2CP31995 323 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IFNGR2P38484 337 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC1A2P43004 574 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BDKRB1P46663 353 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GABRA4P48169 554 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CCR4P51679 360 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ART3Q13508 389 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR50Q13585 617 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DOC2AQ14183 400 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 POU6F1Q14863 301 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC10A1Q14973 349 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IMPG1Q17R60 797 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB6CQ53S08 254 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PIGGQ5H8A4 983 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TECRLQ5HYJ1 363 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 HHATQ5VTY9 493 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 KHDRBS2Q5VWX1 349 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RBMS3Q6XE24 437 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CYHR1Q6ZMK1 362 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LANCL3Q6ZV70 420 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms