RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 WIPI2Q9Y4P8 454 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 UBOX5O94941 541 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 CCNB2O95067 398 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 KITLGP21583 273 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 ERFP50548 548 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 COX10Q12887 443 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 CDK5R2Q13319 367 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 ZMAT1Q5H9K5 638 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 GLCCI1Q86VQ1 547 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 LINC00346Q8IVM7 164 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 LINC00471Q8N535 108 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 AQP11Q8NBQ7 271 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 OR8D4Q8NGM9 314 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 CCDC124Q96CT7 223 aaKnown RBP18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 HAVCR1Q96D42 359 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 DIRC2Q96SL1 478 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 PLA2G12AQ9BZM1 189 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 HDHD2Q9H0R4 259 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 TAS2R1Q9NYW7 299 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 ATPIF1Q9UII2 106 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 PRPF19Q9UMS4 504 aaKnown RBP18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 U3KQV3 271 aa18.19■□□□□ 0.5
PPP4R1-228ENST00000584074 BHLHE40O14503 412 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 MSMBP08118 114 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 CD55P08174 381 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 TNFAIP6P98066 277 aaPredicted RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 HLXQ14774 488 aaPredicted RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 RSPO1Q2MKA7 263 aaPredicted RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 FAM98BQ52LJ0 330 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 SLC18B1Q6NT16 456 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 CFAP77Q6ZQR2 320 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 Q6ZR03 302 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 CYB561A3Q8NBI2 242 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 OR52L1Q8NGH7 329 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 PTP4A1Q93096 173 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 TMEM186Q96B77 213 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 TIMD4Q96H15 378 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 COG8Q96MW5 612 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 DCLRE1CQ96SD1 692 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 COQ7Q99807 217 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 ZNF665Q9H7R5 613 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 HIF1ANQ9NWT6 349 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 IL20Q9NYY1 176 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 PTTG3PQ9NZH4 202 aa18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 SAMHD1Q9Y3Z3 626 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-228ENST00000584074 HLA-DQA2P01906 255 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 PYCR1P32322 319 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 THBS2P35442 1172 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 GGT2P36268 569 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RBMXP38159 391 aaKnown RBP18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RGS6P49758 472 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 SLC36A3Q495N2 470 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 OR2T5Q6IEZ7 315 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RPL13AP3Q6NVV1 102 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RASSF6Q6ZTQ3 369 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 OR2Z1Q8NG97 314 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 OR2T29Q8NH02 315 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 SPATA3Q8NHX4 192 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RAB1CQ92928 201 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 DDOQ99489 341 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 CDADC1Q9BWV3 514 aa18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 MRPL22Q9NWU5 206 aaKnown RBP18.17■□□□□ 0.5
PPP4R1-228ENST00000584074 RAC2P15153 192 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 SRP14P37108 136 aaKnown RBP18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 SRSF2Q01130 221 aaKnown RBP18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 MICAQ29983 383 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 ZNF362Q5T0B9 420 aaPredicted RBP18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 PHC2Q8IXK0 858 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 OR5AS1Q8N127 324 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 OR5L1Q8NGL2 311 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 OR51F2Q8NH61 342 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 ZNRF4Q8WWF5 429 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 TMEM158Q8WZ71 300 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 APOBEC3DQ96AK3 386 aaPredicted RBP18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 ASB9Q96DX5 294 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 PITX2Q99697 317 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 REEP1Q9H902 201 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 TBC1D23Q9NUY8 699 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 DCAF16Q9NXF7 216 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 CYB5R1Q9UHQ9 305 aa18.16■□□□□ 0.5
PPP4R1-228ENST00000584074 J3QW42 95 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 ACOT8O14734 319 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 DEAF1O75398 565 aaPredicted RBP18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 SOX14O95416 240 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 PCMT1P22061 227 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 KRTAP27-1Q3LI81 207 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 ACSM5Q6NUN0 579 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 FBXW12Q6X9E4 464 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 PROKR2Q8NFJ6 384 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 OR2AJ1Q8NGZ0 328 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 LRGUKQ96M69 825 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 THTPAQ9BU02 230 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 TSSK6Q9BXA6 273 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 C1orf21Q9H246 121 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 FAM53CQ9NYF3 392 aa18.15■□□□□ 0.5
PPP4R1-228ENST00000584074 F5H5K5 113 aa18.14■□□□□ 0.49
PPP4R1-228ENST00000584074 IGHV2-5P01817 119 aa18.14■□□□□ 0.49
PPP4R1-228ENST00000584074 TNFSF4P23510 183 aa18.14■□□□□ 0.49
PPP4R1-228ENST00000584074 SLC3A1Q07837 685 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms