RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 C17orf50Q8WW18 174 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 TCEAL3Q969E4 200 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 FLYWCH2Q96CP2 140 aaKnown RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 GSDMAQ96QA5 445 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF160Q9HCG1 818 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 CABIN1Q9Y6J0 2220 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 A0A075B6Q4 140 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 CTAGE15A4D2H0 777 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SMCO2A6NFE2 343 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 TRIM64CA6NLI5 447 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SGK1O00141 431 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ERLIN1O75477 346 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 CCNE2O96020 404 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ARG1P05089 322 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF688P0C7X2 276 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 TNFSF9P41273 254 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 RAB9AP51151 201 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 PPP1CBP62140 327 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 RPS15P62841 145 aaKnown RBP2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 LIPEQ05469 1076 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SELENBP1Q13228 472 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 RCN1Q15293 331 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 MRPL23Q16540 153 aaKnown RBP2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SMUG1Q53HV7 270 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 GPR107Q5VW38 600 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 LUZP2Q86TE4 346 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 CTAGE6Q86UF2 777 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF709Q8N972 641 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 OR4K5Q8NGD3 323 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 OR5B3Q8NH48 314 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 OR10G6Q8NH81 332 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 OR5K2Q8NHB8 316 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 LYPD6BQ8NI32 183 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 FAM81AQ8TBF8 368 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ESR2Q92731 530 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 PTX4Q96A99 478 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 EEF1AKMT3Q96AZ1 226 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 XPO6Q96QU8 1125 aaKnown RBP2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 HSD17B10Q99714 261 aaKnown RBP2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 RNF5Q99942 180 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ZYG11BQ9C0D3 744 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 FAM192AQ9GZU8 254 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SPNS1Q9H2V7 528 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 C1orf198Q9H425 327 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ZDHHC4Q9NPG8 344 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF835Q9Y2P0 537 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 SAR1BQ9Y6B6 198 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 NINLQ9Y2I6 1382 aa2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
PPP4R1-227ENST00000583988 KBTBD11-OT1A0A1B0GTJ5 212 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 COLCA2A8K830 154 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 RAD51CO43502 376 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 CDH16O75309 829 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 REM1O75628 298 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 IL1RNP18510 177 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 U2AF2P26368 475 aaKnown RBP eCLIP2.17□□□□□ -2.062e-10■□□□□ 10
PPP4R1-227ENST00000583988 GTF2E2P29084 291 aaKnown RBP2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 SYKP43405 635 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 EIF3EP60228 445 aaKnown RBP2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 CCNA1P78396 465 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 LY6EQ16553 131 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 HSP90AB3PQ58FF7 597 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 SOHLH1Q5JUK2 328 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 STUMQ69YW2 141 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 TMEM205Q6UW68 189 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 MBOAT2Q6ZWT7 520 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 SLC16A13Q7RTY0 426 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 SNX20Q7Z614 316 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 GABRG1Q8N1C3 465 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 CBR4Q8N4T8 237 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 COX18Q8N8Q8 333 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 OR52E2Q8NGJ4 325 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 OR6Q1Q8NGQ2 317 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 OR9A2Q8NGT5 310 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 CAPSLQ8WWF8 208 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 L3HYPDHQ96EM0 354 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 ANKRA2Q9H9E1 313 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 EXOSC4Q9NPD3 245 aaKnown RBP2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 MED4Q9NPJ6 270 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 CLN8Q9UBY8 286 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 ENOPH1Q9UHY7 261 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 RABL2BQ9UNT1 228 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 COL1A2P08123 1366 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 TNS2Q63HR2 1409 aa2.17□□□□□ -2.06
PPP4R1-227ENST00000583988 NSD2O96028 1365 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 KCNE1BA0A087WTH5 132 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 IGHV3OR16-9A0A0B4J2B5 98 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF850A8MQ14 1090 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 PDZK1P1A8MUH7 402 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 CACNG3O60359 315 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 SLC22A5O76082 557 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 HPRT1P00492 218 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 IGLV3-19P01714 112 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 GGT1P19440 569 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 STOMP27105 288 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 PRRX1P54821 245 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF121P58317 390 aaPredicted RBP2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 CRADDP78560 199 aa2.16□□□□□ -2.06
PPP4R1-227ENST00000583988 MERTKQ12866 999 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms