RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 OTOSQ8NHW6 89 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 SMAP2Q8WU79 429 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 ZNRF4Q8WWF5 429 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 ABTB1Q969K4 478 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 WDYHV1Q96HA8 205 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 EMC6Q9BV81 110 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 MROQ9BYG7 248 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 TTTY10Q9BZA0 68 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 B3GAT2Q9NPZ5 323 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 KLHL9Q9P2J3 617 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 B3GAT1Q9P2W7 334 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 NDRG3Q9UGV2 375 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 KCNG2Q9UJ96 466 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 COA3Q9Y2R0 106 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 POLR1DQ9Y2S0 133 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 DSCAMO60469 2012 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 HEATR5AQ86XA9 2040 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CD8B2A6NJW9 211 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 GABRPO00591 440 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 CXCL13O43927 109 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 AQP8O94778 261 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 ZNF432O94892 652 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CDRT1O95170 752 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 LALBAP00709 142 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PGA4P0DJD7 388 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PGA3P0DJD8 388 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 ALOX5APP20292 161 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 MYL9P24844 172 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 LAP3P28838 519 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 ZNF84P51523 738 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 P2RY4P51582 365 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 GFRA1P56159 465 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CLDN15P56746 228 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CAMK2DQ13557 499 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 DCTN2Q13561 401 aaKnown RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 ZNF846Q147U1 533 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CDK5R1Q15078 307 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 BCL2A1Q16548 175 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 TEX30Q5JUR7 227 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CARD17Q5XLA6 110 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 MED12LQ86YW9 2145 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 OR2AJ1Q8NGZ0 328 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 OR10D3Q8NH80 312 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 NSMAFQ92636 917 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 THRSPQ92748 146 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 GHSRQ92847 366 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PIGTQ969N2 578 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 SMIM19Q96E16 107 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PELI1Q96FA3 418 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PIK3IP1Q96FE7 263 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CCL19Q99731 98 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 TM9SF2Q99805 663 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 MED18Q9BUE0 208 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 HDHD5Q9BXW7 423 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PRRG4Q9BZD6 226 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 C6orf62Q9GZU0 229 aaPredicted RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 PRDM14Q9GZV8 571 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 COMMD4Q9H0A8 199 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 SEC61A2Q9H9S3 476 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 CALHM2Q9HA72 323 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PLGRKTQ9HBL7 147 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 SNTG1Q9NSN8 517 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 ACOXLQ9NUZ1 547 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 EMC3Q9P0I2 261 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 KLHL13Q9P2N7 655 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 MCTS1Q9ULC4 181 aaKnown RBP8.94□□□□□ -0.98
SS18-210ENST00000578700 COPS3Q9UNS2 423 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 RCE1Q9Y256 329 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
SS18-210ENST00000578700 SONP18583 2426 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 MBD3L4A6NDZ8 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 MBD3L3A6NE82 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 MBD3L5A6NJ08 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 ZNF879B4DU55 563 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GPR171O14626 319 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 SMAD9O15198 467 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 OGG1O15527 345 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 SLC43A1O75387 559 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 ZNF254O75437 659 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GATBO75879 557 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 IL18BPO95998 194 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GAAP10253 952 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 CD8BP10966 210 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 CFL1P23528 166 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 RIDAP52758 137 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 CLDN20P56880 219 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 FABP5Q01469 135 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 FMODQ06828 376 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 RASGEF1BQ0VAM2 473 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms